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DESCRIPTION
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DESCRIPTION
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Package: xcmsTutorials
Title: Exploring and Analyzing LC-MS data with Spectra and xcms
Version: 1.1.2
Authors@R: c(
person(given = "Johannes", family = "Rainer",
email = "[email protected]",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-6977-7147")),
person(given = "Philippine", family = "Louail",
email = "[email protected]",
role = c("ctb"),
comment = c(ORCID = "0009-0007-5429-6846")))
Description: This resource contains examples and tutorials for the analysis of
LC-MS data using the *MsExperiment*, *Spectra* and *xcms* packages.
Various examples show data handling, representation, visualization
and analysis of LC-MS data with these packages. A special emphasis
is given on the definition of various data set-specific parameters
for analysis algorithms of the *xcms* package.
License: Artistic-2.0
Encoding: UTF-8
LazyData: false
Roxygen: list(markdown = TRUE)
Depends:
R (>= 4.3),
xcms (>= 4.1.5),
Spectra (>= 1.11.10),
MsExperiment,
msdata
Suggests:
MetaboCoreUtils,
MsCoreUtils,
MSnbase,
png,
BiocStyle,
knitr,
rmarkdown,
RColorBrewer,
SummarizedExperiment,
pheatmap,
RCurl
URL: https://jorainer.github.io/xcmsTutorials/
BugReports: https://github.com/jorainer/xcmsTutorials/issues/new
VignetteBuilder: knitr
RoxygenNote: 7.2.3
DockerImage: jorainer/xcms_tutorials:RELEASE_3_19