From 80d00efade3a3c030bb9115dec6fd1836d904d94 Mon Sep 17 00:00:00 2001
From: js2264 <jacquesserizay@gmail.com>
Date: Fri, 21 Jul 2023 11:43:24 +0200
Subject: [PATCH] fix: extendReads in IP/Inp

---
 tinyMapper.sh | 1 +
 1 file changed, 1 insertion(+)

diff --git a/tinyMapper.sh b/tinyMapper.sh
index 75ab155..af14f3d 100755
--- a/tinyMapper.sh
+++ b/tinyMapper.sh
@@ -1149,6 +1149,7 @@ if test "${DO_CALIBRATION}" == 0 ; then
         --numberOfProcessors "${CPU}" \
         "${BLACKLIST_OPTIONS}" \
         --binSize 5 \
+        --extendReads \
         --skipNonCoveredRegions \
         "${IGNORE_DUPLICATES}""
     fn_exec "${cmd}" "${LOGFILE}" 2>> "${LOGFILE}"