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你好!非常感谢你开发了这么好用的包!我在使用averageHeatmap的时候遇到了问题,我查看了实例教程 split rows and columns
AverageHeatmap(object = pbmc, markerGene = markers$gene, column_split = 1:9, row_split = paste("cluster",markers$cluster,sep = ' ')[c(1:30,31:34,36:45)], border = T)
column_split已经理解,是按照列数进行分割,但是row_split没有完全看懂,请问45是因为一共9个column,每个column有5个gene,然后第7个column只展示31-34个gene。请问这么理解正确嘛? 我在运行我的代码的时候: scRNAtoolVis::AverageHeatmap(object= Epi_filter, markerGene = top5$gene, annoCol = T, myanCol = mycolors, border = T, column_split = 0:19, row_split = paste("cluster",top5$cluster,sep = ' ')[c(1:100)], ) Error: Length or nrow of row_split should be same as nrow of matrix. nrow(top5) [1] 100 产生了报错,我查看了我的top5确实有100行,想请教一下您这个问题!
row_split
matrix
The text was updated successfully, but these errors were encountered:
好像是基因有重复名称来着,才做了这个调整
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你好!非常感谢你开发了这么好用的包!我在使用averageHeatmap的时候遇到了问题,我查看了实例教程
split rows and columns
AverageHeatmap(object = pbmc,
markerGene = markers$gene,
column_split = 1:9,
row_split = paste("cluster",markers$cluster,sep = ' ')[c(1:30,31:34,36:45)],
border = T)
column_split已经理解,是按照列数进行分割,但是row_split没有完全看懂,请问45是因为一共9个column,每个column有5个gene,然后第7个column只展示31-34个gene。请问这么理解正确嘛?
我在运行我的代码的时候:
scRNAtoolVis::AverageHeatmap(object= Epi_filter,
markerGene = top5$gene,
annoCol = T,
myanCol = mycolors,
border = T,
column_split = 0:19,
row_split = paste("cluster",top5$cluster,sep = ' ')[c(1:100)],
)
Error: Length or nrow of
row_split
should be same as nrow ofmatrix
.nrow(top5)
[1] 100
产生了报错,我查看了我的top5确实有100行,想请教一下您这个问题!
The text was updated successfully, but these errors were encountered: