From 12f69b530bebbffb442c0501ff6c490b8eca516c Mon Sep 17 00:00:00 2001 From: Marcel Martin Date: Thu, 22 Feb 2024 09:09:43 +0100 Subject: [PATCH] Use optimized parameters See #397 --- src/indexparameters.cpp | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/src/indexparameters.cpp b/src/indexparameters.cpp index 2a1a6b78..eb2df50c 100644 --- a/src/indexparameters.cpp +++ b/src/indexparameters.cpp @@ -35,13 +35,13 @@ struct Profile { static auto max{std::numeric_limits::max()}; static std::vector profiles = { - Profile{ 50, 90, 20, -4, -3, 2}, - Profile{100, 110, 20, -4, -2, 2}, + Profile{ 50, 70, 18, -4, -2, 1}, + Profile{ 75, 90, 20, -4, -3, 2}, + Profile{100, 110, 19, -4, 0, 3}, Profile{125, 135, 20, -4, -1, 4}, - Profile{150, 175, 20, -4, 1, 7}, - Profile{250, 275, 20, -4, 4, 13}, - Profile{300, 375, 22, -4, 2, 12}, - Profile{400, max, 23, -6, 2, 12}, + Profile{150, 175, 21, -4, 2, 6}, + Profile{250, 375, 22, -4, 4, 13}, + Profile{400, max, 24, -6, 6, 13}, }; /* Create an IndexParameters instance based on a given read length.