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I managed to install everything on an Amazon EC2 instance with absolutely no problem.
However, after adding the remote server URL in the QuPath extension, the server fails with the following stacktrace:
File "/home/ec2-user/anaconda3/envs/cellsparse-api/lib/python3.11/site-packages/cellsparse_api/main.py", line 30, in decode_image
return np.array(Image.open(io.BytesIO(base64.b64decode(b64data))))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ec2-user/anaconda3/envs/cellsparse-api/lib/python3.11/site-packages/PIL/Image.py", line 3298, in open
raise UnidentifiedImageError(msg)
PIL.UnidentifiedImageError: cannot identify image file <_io.BytesIO object at 0x7f0f6a05d6c0>
I'm trying to figure out if this is a problem of the extension or of the API server. Can you help? Thanks!
Hi, thanks for your repository!
I managed to install everything on an Amazon EC2 instance with absolutely no problem.
However, after adding the remote server URL in the QuPath extension, the server fails with the following stacktrace:
I'm trying to figure out if this is a problem of the extension or of the API server. Can you help? Thanks!
PS: cross-posted to ksugar/cellsparse-api issue#2
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