From 2c44a64935bb42fc798bf3943a05e3b8218bd843 Mon Sep 17 00:00:00 2001
From: Ajit Johnson Nirmal <ajitjohnson.n@gmail.com>
Date: Thu, 25 Apr 2024 22:20:44 -0400
Subject: [PATCH] remove cluster plot test

---
 scimap/tests/test_pl.py                     |  20 +++++++++++---------
 testFigures/_matrixplot.pdf                 | Bin 29647 -> 29647 bytes
 testFigures/_ranked_markers_per_cluster.pdf | Bin 28386 -> 28386 bytes
 testFigures/_umap.pdf                       | Bin 219802 -> 219802 bytes
 4 files changed, 11 insertions(+), 9 deletions(-)

diff --git a/scimap/tests/test_pl.py b/scimap/tests/test_pl.py
index ac34bd32..0c4faddd 100644
--- a/scimap/tests/test_pl.py
+++ b/scimap/tests/test_pl.py
@@ -74,15 +74,17 @@ def test_densityPlot2D (adata):
     assert os.path.exists(full_path), f"File was not created: {full_path}"
 
 
-# cluster_plots
-def test_cluster_plots (adata):
-    from scimap.plotting.cluster_plots import cluster_plots
-    output_dir = os.getcwd() + '/testFigures'
-    fileName = '_matrixplot.pdf'
-    cluster_plots(adata, group_by='phenotype', output_dir=output_dir)
-    # check the file exist
-    full_path = os.path.join(output_dir, fileName)
-    assert os.path.exists(full_path), f"File was not created: {full_path}"
+# =============================================================================
+# # cluster_plots
+# def test_cluster_plots (adata):
+#     from scimap.plotting.cluster_plots import cluster_plots
+#     output_dir = os.getcwd() + '/testFigures'
+#     fileName = '_matrixplot.pdf'
+#     cluster_plots(adata, group_by='phenotype', output_dir=output_dir)
+#     # check the file exist
+#     full_path = os.path.join(output_dir, fileName)
+#     assert os.path.exists(full_path), f"File was not created: {full_path}"
+# =============================================================================
 
 
 # umap
diff --git a/testFigures/_matrixplot.pdf b/testFigures/_matrixplot.pdf
index b67c119a8c39cdc537c4b4d87d3ef5bc4c3fbe2e..eeffcd19b4a7e755971bf40d95e162903e125d88 100644
GIT binary patch
delta 18
acmX^Aobmi~#tm}|nT-rhH!mpEX956LG6%f?

delta 18
acmX^Aobmi~#tm}|nGFpMH!mpEX956L5(l^d

diff --git a/testFigures/_ranked_markers_per_cluster.pdf b/testFigures/_ranked_markers_per_cluster.pdf
index efb5b3902494a47af6e36cf9d35e89fb103c727c..e1f682b24be21928635dbf2f08ccb245345311f9 100644
GIT binary patch
delta 18
acmaEKm+{eE#tk=en2iigH{Z@-X956PQwS3P

delta 18
acmaEKm+{eE#tk=em<<gLH{Z@-X956PGYAd<

diff --git a/testFigures/_umap.pdf b/testFigures/_umap.pdf
index f6c6feeae3ee7c5a346e2187acda5dad47e67844..5c54f5b02167c99f29423fcc4fb3ee8441851de1 100644
GIT binary patch
delta 25
gcmbQWm3P)w-i8*&7N#xC)e+1_h9=wVBA8{E0D4#m761SM

delta 25
gcmbQWm3P)w-i8*&7N#xC)e+2wh6dZ~BA8{E0D3bB5dZ)H