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batch_train_3fold_exp.sh
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batch_train_3fold_exp.sh
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python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_clindamycin_3fold/Fold1 -o Model_3fold_batch_best/Cdi_clindamycin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_clindamycin_3fold/Fold2 -o Model_3fold_batch_best/Cdi_clindamycin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_clindamycin_3fold/Fold3 -o Model_3fold_batch_best/Cdi_clindamycin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_3fold/Fold1 -o Model_3fold_batch_best/Aba_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_3fold/Fold2 -o Model_3fold_batch_best/Aba_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_3fold/Fold3 -o Model_3fold_batch_best/Aba_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_3fold/Fold1 -o Model_3fold_batch_best/Ecoli_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_3fold/Fold2 -o Model_3fold_batch_best/Ecoli_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_3fold/Fold3 -o Model_3fold_batch_best/Ecoli_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_3fold/Fold1 -o Model_3fold_batch_best/Kcp_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_3fold/Fold2 -o Model_3fold_batch_best/Kcp_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_3fold/Fold3 -o Model_3fold_batch_best/Kcp_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_amoxicillin_3fold/Fold1 -o Model_3fold_batch_best/Kcp_amoxicillin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_amoxicillin_3fold/Fold2 -o Model_3fold_batch_best/Kcp_amoxicillin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_amoxicillin_3fold/Fold3 -o Model_3fold_batch_best/Kcp_amoxicillin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_levofloxacin_3fold/Fold1 -o Model_3fold_batch_best/Kcp_levofloxacin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_levofloxacin_3fold/Fold2 -o Model_3fold_batch_best/Kcp_levofloxacin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_levofloxacin_3fold/Fold3 -o Model_3fold_batch_best/Kcp_levofloxacin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_imipenem_3fold/Fold1 -o Model_3fold_batch_best/Aba_imipenem_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_imipenem_3fold/Fold2 -o Model_3fold_batch_best/Aba_imipenem_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_imipenem_3fold/Fold3 -o Model_3fold_batch_best/Aba_imipenem_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_ciprofloxacin_3fold/Fold1 -o Model_3fold_batch_best/Sau_ciprofloxacin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_ciprofloxacin_3fold/Fold2 -o Model_3fold_batch_best/Sau_ciprofloxacin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_ciprofloxacin_3fold/Fold3 -o Model_3fold_batch_best/Sau_ciprofloxacin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_3fold/Fold1 -o Model_3fold_batch_best/Cdi_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_3fold/Fold2 -o Model_3fold_batch_best/Cdi_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_3fold/Fold3 -o Model_3fold_batch_best/Cdi_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_ethionamide_3fold/Fold1 -o Model_3fold_batch_best/Mtb_ethionamide_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_ethionamide_3fold/Fold2 -o Model_3fold_batch_best/Mtb_ethionamide_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_ethionamide_3fold/Fold3 -o Model_3fold_batch_best/Mtb_ethionamide_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_ciprofloxacin_3fold/Fold1 -o Model_3fold_batch_best/Ecoli_ciprofloxacin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_ciprofloxacin_3fold/Fold2 -o Model_3fold_batch_best/Ecoli_ciprofloxacin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_ciprofloxacin_3fold/Fold3 -o Model_3fold_batch_best/Ecoli_ciprofloxacin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_amoxicillin_3fold/Fold1 -o Model_3fold_batch_best/Mtb_amoxicillin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_amoxicillin_3fold/Fold2 -o Model_3fold_batch_best/Mtb_amoxicillin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_amoxicillin_3fold/Fold3 -o Model_3fold_batch_best/Mtb_amoxicillin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_amikacin_3fold/Fold1 -o Model_3fold_batch_best/Aba_amikacin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_amikacin_3fold/Fold2 -o Model_3fold_batch_best/Aba_amikacin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_amikacin_3fold/Fold3 -o Model_3fold_batch_best/Aba_amikacin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_clarithromycin_3fold/Fold1 -o Model_3fold_batch_best/Cdi_clarithromycin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_clarithromycin_3fold/Fold2 -o Model_3fold_batch_best/Cdi_clarithromycin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_clarithromycin_3fold/Fold3 -o Model_3fold_batch_best/Cdi_clarithromycin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_clindamycin_3fold/Fold1 -o Model_3fold_batch_best/Sau_clindamycin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_clindamycin_3fold/Fold2 -o Model_3fold_batch_best/Sau_clindamycin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_clindamycin_3fold/Fold3 -o Model_3fold_batch_best/Sau_clindamycin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_3fold/Fold1 -o Model_3fold_batch_best/Sau_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_3fold/Fold2 -o Model_3fold_batch_best/Sau_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_3fold/Fold3 -o Model_3fold_batch_best/Sau_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_ampicillin_3fold/Fold1 -o Model_3fold_batch_best/Ecoli_ampicillin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_ampicillin_3fold/Fold2 -o Model_3fold_batch_best/Ecoli_ampicillin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_ampicillin_3fold/Fold3 -o Model_3fold_batch_best/Ecoli_ampicillin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_ciprofloxacin_3fold/Fold1 -o Model_3fold_batch_best/Kcp_ciprofloxacin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_ciprofloxacin_3fold/Fold2 -o Model_3fold_batch_best/Kcp_ciprofloxacin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Kcp_ciprofloxacin_3fold/Fold3 -o Model_3fold_batch_best/Kcp_ciprofloxacin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_amoxicillin_3fold_old/Fold1 -o Model_3fold_batch_best/Mtb_amoxicillin_3fold_old/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_amoxicillin_3fold_old/Fold2 -o Model_3fold_batch_best/Mtb_amoxicillin_3fold_old/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_amoxicillin_3fold_old/Fold3 -o Model_3fold_batch_best/Mtb_amoxicillin_3fold_old/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_erythromycin_3fold/Fold1 -o Model_3fold_batch_best/Sau_erythromycin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_erythromycin_3fold/Fold2 -o Model_3fold_batch_best/Sau_erythromycin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Sau_erythromycin_3fold/Fold3 -o Model_3fold_batch_best/Sau_erythromycin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_ampicillin_3fold/Fold1 -o Model_3fold_batch_best/Aba_ampicillin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_ampicillin_3fold/Fold2 -o Model_3fold_batch_best/Aba_ampicillin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Aba_ampicillin_3fold/Fold3 -o Model_3fold_batch_best/Aba_ampicillin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_moxifloxacin_3fold/Fold1 -o Model_3fold_batch_best/Cdi_moxifloxacin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_moxifloxacin_3fold/Fold2 -o Model_3fold_batch_best/Cdi_moxifloxacin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Cdi_moxifloxacin_3fold/Fold3 -o Model_3fold_batch_best/Cdi_moxifloxacin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_3fold/Fold1 -o Model_3fold_batch_best/Mtb_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_3fold/Fold2 -o Model_3fold_batch_best/Mtb_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_3fold/Fold3 -o Model_3fold_batch_best/Mtb_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_ciprofloxacin_3fold/Fold1 -o Model_3fold_batch_best/Mtb_ciprofloxacin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_ciprofloxacin_3fold/Fold2 -o Model_3fold_batch_best/Mtb_ciprofloxacin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Mtb_ciprofloxacin_3fold/Fold3 -o Model_3fold_batch_best/Mtb_ciprofloxacin_3fold/Fold3
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_amoxicillin_3fold/Fold1 -o Model_3fold_batch_best/Ecoli_amoxicillin_3fold/Fold1
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_amoxicillin_3fold/Fold2 -o Model_3fold_batch_best/Ecoli_amoxicillin_3fold/Fold2
python StrainAMR_model_train.py -a 0 -i Benchmark_features/Ecoli_amoxicillin_3fold/Fold3 -o Model_3fold_batch_best/Ecoli_amoxicillin_3fold/Fold3