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release-tool

The tool is used to generate mirna release datasets

# install pipsi
curl https://raw.githubusercontent.com/mitsuhiko/pipsi/master/get-pipsi.py | python

# clone this tool
git clone [email protected]:lindaxiang/release-tool.git

# clone the annotations
git clone [email protected]:ICGC-TCGA-PanCancer/pcawg-operations.git

# install this tool
cd release-tool
pipsi install --editable .

# run the tool
release_tool build

# output data is under
examples/mirna_release/output