config.ini

[ALPHAFOLD2]
alphafold_path = /data2/lipan/usr/alphafold-2.1.0

[EXCUTABLE]
jackhmmer_binary_path       = 
hhblits_binary_path         = 
hhsearch_binary_path        = 
hmmsearch_binary_path       = 
hmmbuild_binary_path        = 
kalign_binary_path          = 

[DATABASE]
params_parent_dir           = /data03/lipan/Protein_Structure/AF2_db
uniref90_database_path      = /data03/lipan/Protein_Structure/AF2_db/uniref90/uniref90.fasta
mgnify_database_path        = /data03/lipan/Protein_Structure/AF2_db/mgnify/mgy_clusters.fa
template_mmcif_dir          = /data03/lipan/Protein_Structure/AF2_db/pdb_mmcif/mmcif_files
obsolete_pdbs_path          = /data03/lipan/Protein_Structure/AF2_db/pdb_mmcif/obsolete.dat
uniprot_database_path       = /data03/lipan/Protein_Structure/AF2_db/uniprot/uniprot.fasta
pdb_seqres_database_path    = /data03/lipan/Protein_Structure/AF2_db/pdb_seqres/pdb_seqres.txt
uniclust30_database_path    = /data03/lipan/Protein_Structure/AF2_db/uniclust30/UniRef30_2020_02
bfd_database_path           = /data03/lipan/Protein_Structure/AF2_db/bfd/bfd_metaclust_clu_complete_id30_c90_final_seq.sorted_opt
pdb70_database_path         = /data03/lipan/Protein_Structure/AF2_db/pdb70/pdb70