DESCRIPTION

Package: rTASSEL
Version: 0.9.33
Date: 2018-12-21
Title: R Front-End for TASSEL
Authors@R: c(
    person(
        given = "Brandon",
        family = "Monier",
        email = "brandon.monier@gmail.com",
        role = c("aut", "cre"),
        comment = c(ORCID = "0000-0001-6797-1221")
    ),
    person(
        given = "Terry",
        family = "Casstevens",
        role = c("aut"),
        comment = c(ORCID = "0000-0001-7602-0487")
    ),
    person(
        given = "Peter",
        family = "Bradbury",
        role = c("aut"),
        comment = c(ORCID = "0000-0003-3825-8480")
    ),
    person(
        given = "Ed",
        family = "Buckler",
        role = c("aut"),
        comment = c(ORCID = "0000-0002-3100-371X")
    ))
Description:
    The aim of rTASSEL is to provide an R front-end for the
    Java program, TASSEL. TASSEL is a software package used to evaluate
    trait associations, evolutionary patterns, and linkage disequilibrium.
    Additionally, this software allows for a number of powerful statistical
    approaches to association mapping such general and mixed linear modelling.
License: Apache License (>= 2) | file LICENSE
URL:
    https://github.com/maize-genetics/rTASSEL
Depends:
    R (>= 4.1.0)
Imports:
    ape,
    GenomicRanges,
    ggplot2,
    IRanges,
    methods,
    plotly,
    rJava,
    rlang,
    S4Vectors,
    SummarizedExperiment
Suggests:
    BiocStyle,
    knitr,
    magrittr,
    rmarkdown,
    testthat
SystemRequirements: Java (>= 8.0)
Encoding: UTF-8
LazyData: true
VignetteBuilder: knitr
RoxygenNote: 7.2.3
biocViews:
    GenomeWideAssociation