diff --git a/.github/workflows/codeql.yml b/.github/workflows/codeql.yml new file mode 100644 index 0000000..f76675a --- /dev/null +++ b/.github/workflows/codeql.yml @@ -0,0 +1,82 @@ +# For most projects, this workflow file will not need changing; you simply need +# to commit it to your repository. +# +# You may wish to alter this file to override the set of languages analyzed, +# or to provide custom queries or build logic. +# +# ******** NOTE ******** +# We have attempted to detect the languages in your repository. Please check +# the `language` matrix defined below to confirm you have the correct set of +# supported CodeQL languages. +# +name: "CodeQL" + +on: + push: + branches: [ "main" ] + pull_request: + # The branches below must be a subset of the branches above + branches: [ "main" ] + schedule: + - cron: '19 14 * * 5' + +jobs: + analyze: + name: Analyze + # Runner size impacts CodeQL analysis time. To learn more, please see: + # - https://gh.io/recommended-hardware-resources-for-running-codeql + # - https://gh.io/supported-runners-and-hardware-resources + # - https://gh.io/using-larger-runners + # Consider using larger runners for possible analysis time improvements. + runs-on: ${{ (matrix.language == 'swift' && 'macos-latest') || 'ubuntu-latest' }} + timeout-minutes: ${{ (matrix.language == 'swift' && 120) || 360 }} + permissions: + actions: read + contents: read + security-events: write + + strategy: + fail-fast: false + matrix: + language: [ 'python' ] + # CodeQL supports [ 'cpp', 'csharp', 'go', 'java', 'javascript', 'python', 'ruby', 'swift' ] + # Use only 'java' to analyze code written in Java, Kotlin or both + # Use only 'javascript' to analyze code written in JavaScript, TypeScript or both + # Learn more about CodeQL language support at https://aka.ms/codeql-docs/language-support + + steps: + - name: Checkout repository + uses: actions/checkout@v3 + + # Initializes the CodeQL tools for scanning. + - name: Initialize CodeQL + uses: github/codeql-action/init@v2 + with: + languages: ${{ matrix.language }} + # If you wish to specify custom queries, you can do so here or in a config file. + # By default, queries listed here will override any specified in a config file. + # Prefix the list here with "+" to use these queries and those in the config file. + + # For more details on CodeQL's query packs, refer to: https://docs.github.com/en/code-security/code-scanning/automatically-scanning-your-code-for-vulnerabilities-and-errors/configuring-code-scanning#using-queries-in-ql-packs + # queries: security-extended,security-and-quality + + + # Autobuild attempts to build any compiled languages (C/C++, C#, Go, Java, or Swift). + # If this step fails, then you should remove it and run the build manually (see below) + - name: Autobuild + uses: github/codeql-action/autobuild@v2 + + # ℹī¸ Command-line programs to run using the OS shell. + # 📚 See https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#jobsjob_idstepsrun + + # If the Autobuild fails above, remove it and uncomment the following three lines. + # modify them (or add more) to build your code if your project, please refer to the EXAMPLE below for guidance. + + # - run: | + # echo "Run, Build Application using script" + # ./location_of_script_within_repo/buildscript.sh + + - name: Perform CodeQL Analysis + uses: github/codeql-action/analyze@v2 + with: + category: "/language:${{matrix.language}}" diff --git a/.github/workflows/testing.yml b/.github/workflows/testing.yml new file mode 100644 index 0000000..85c2663 --- /dev/null +++ b/.github/workflows/testing.yml @@ -0,0 +1,67 @@ +name: CI + +on: + push: + branches: [ main ] + pull_request: + branches: [ main ] + + +jobs: + tests: + name: "Python ${{ matrix.python-version }}" + runs-on: ${{ matrix.os }} + + defaults: + run: + shell: bash -el {0} + + strategy: + matrix: + os: [ubuntu-latest, macos-latest] + python-version: ["3.8", "3.9", "3.10", "3.11"] + + steps: + - uses: "actions/checkout@v3" + with: + fetch-depth: 0 + + # Setup env + - uses: conda-incubator/setup-miniconda@v2 + with: + activate-environment: condiga + environment-file: environment.yml + python-version: ${{ matrix.python-version }} + auto-activate-base: false + + - name: "Setup Phables on ${{ matrix.os }} for Python ${{ matrix.python-version }}" + run: | + python -m pip install --upgrade pip + pip install . + + - name: "Generate coverage report on ${{ matrix.os }} for Python ${{ matrix.python-version }}" + run: | + pip install pytest pytest-cov + pytest --cov=./ --cov-report xml --cov-report lcov --cov-append + + - name: Coveralls Parallel + uses: coverallsapp/github-action@master + with: + parallel: true + github-token: ${{ secrets.github_token }} + flag-name: run-${{ matrix.test_number }} + path-to-lcov: "coverage.lcov" + + finish: + needs: tests + runs-on: ${{ matrix.os }} + strategy: + matrix: + os: [ubuntu-latest, macos-latest] + python-version: ["3.8", "3.9", "3.10", "3.11"] + steps: + - name: Coveralls Finished + uses: coverallsapp/github-action@master + with: + github-token: ${{ secrets.github_token }} + parallel-finished: true