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pyproject.toml
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pyproject.toml
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[build-system]
requires = ["flit_core >=3.2,<4"]
build-backend = "flit_core.buildapi"
[project]
name = "pyaerocom"
version = "0.25.0.dev0"
authors = [{ name = "MET Norway" }]
description = "pyaerocom model evaluation software"
classifiers = [
"Programming Language :: Python :: 3 :: Only",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)",
"Operating System :: OS Independent",
"Development Status :: 3 - Alpha",
"Intended Audience :: Science/Research",
"Intended Audience :: Education",
"Topic :: Scientific/Engineering :: Atmospheric Science",
]
requires-python = ">=3.10"
dependencies = [
"aerovaldb>=0.1.1",
"scitools-iris>=3.8.1",
"xarray>=2022.12.0",
"cartopy>=0.21.1",
"matplotlib>=3.7.1",
"scipy>=1.10.1",
"pandas>=1.5.3",
"numpy>=1.24.4, <2.0.0",
"seaborn>=0.12.2",
"dask",
"geonum==1.5.0",
"simplejson",
"requests",
"geocoder_reverse_natural_earth",
"tqdm",
"openpyxl",
"geojsoncontour",
"typer>=0.7.0",
# python < 3.11
'tomli>=2.0.1; python_version < "3.11"',
'importlib-resources>=5.10; python_version < "3.11"',
'typing-extensions>=4.6.1; python_version < "3.11"',
# https://github.com/SciTools/cf-units/issues/218
'cf-units>=3.1',
"pydantic>=2.7.1",
"pyproj>=3.0.0",
"pyaro>=0.0.12",
"pooch>=1.7.0",
"psutil>=5.0.0",
]
[project.readme]
file = "README.rst"
content-type = "text/x-rst"
[project.urls]
Homepage = "https://github.com/metno/pyaerocom"
"Bug Tracker" = "https://github.com/metno/pyaerocom/issues"
Documentation = "https://pyaerocom.readthedocs.io"
"Source Code" = "https://github.com/metno/pyaerocom"
[project.optional-dependencies]
docs = [
"sphinx>=7.2.6",
"sphinxcontrib-napoleon",
"sphinx_rtd_theme",
"sphinx-argparse",
"nbsphinx",
]
test = ["pytest>=7.4", "pytest-dependency", "pytest-cov", "packaging"]
lint = ["mypy>=1.5.1", "types-requests", "types-setuptools", "types-simplejson"]
dev = ["pytest-sugar", "pytest-xdist", "pre-commit"]
[project.scripts]
pya = "pyaerocom.scripts.cli:main"
cams2_83 = "pyaerocom.scripts.cams2_83.cli:app"
cams2_83_mos = "pyaerocom.scripts.cams2_83.cli_mos:app"
[tool.flit.sdist]
include = ["LICENSE", "README.*", "pyaerocom_env.yml", "tests"]
exclude = [
".git*",
".pre-commit-config.yaml",
".readthedocs.yaml",
"changelog",
"docs",
"release_checklist.md",
"scripts",
"suppl",
]
[tool.pytest.ini_options]
minversion = "7.4"
log_cli = false
log_cli_level = "WARNING"
addopts = ["--failed-first", "--import-mode=importlib"]
xfail_strict = true
testpaths = ["tests"]
filterwarnings = [
# treat warnings as errors
"error",
"ignore::pytest.PytestUnraisableExceptionWarning",
# except deprecation and future warnings ouside this packege
'ignore::PendingDeprecationWarning:^(?!pyaerocom|tests).*:',
'ignore::DeprecationWarning:^(?!pyaerocom|tests).*:',
'ignore::FutureWarning:^(?!pyaerocom|tests).*:',
# Ignore self-deprecation warnings related to plotting
'ignore:matplotlib based plotting is no longer directly supported. This (function|class) may be removed in future versions\.:DeprecationWarning:(pyaerocom|tests):',
# and not on this list
"ignore:Using DEFAULT_SPHERICAL_EARTH_RADIUS:UserWarning:iris.*:", # Issue #1394
]
[tool.coverage.run]
source = ["pyaerocom"]
omit = [
# not used
"pyaerocom/aeroval/utils.py",
"pyaerocom/io/read_aeronet_invv2.py",
"pyaerocom/io/read_aeronet_sdav2.py",
"pyaerocom/io/read_aeronet_sunv2.py",
"pyaerocom/plugins/gaw/*",
"pyaerocom/extras/satellite_l2/*",
]
[tool.coverage.report]
fail_under = 75
skip_covered = true
exclude_lines = [
"pragma: no cover",
"NotImplementedError",
"abc.ABC",
'if __name__ == "__main__":',
]
[tool.ruff]
include = ["pyproject.toml", "pyaerocom/**/*.py", "tests/**/*.py"]
target-version = "py310"
line-length = 99
extend-exclude = ["pyaerocom-tutorials", "scripts"]
[tool.ruff.lint]
select = ["E", "F", "I002", "UP"]
ignore = ["E402", "E501"]
[tool.ruff.lint.per-file-ignores]
"__init__.py" = ["F401"]
"cli.py" = ["UP007"]
"cli_mos.py" = ["UP007"]
"*/extras/satellite_l2/*.py" = [
"F402", # https://docs.astral.sh/ruff/rules/import-shadowed-by-loop-var/
"F821", # https://docs.astral.sh/ruff/rules/undefined-name/
"F841", # https://docs.astral.sh/ruff/rules/unused-variable/
]
[tool.mypy]
python_version = "3.10"
warn_unused_configs = true
warn_unused_ignores = true
warn_no_return = true
warn_return_any = false
warn_unreachable = true
show_error_codes = true
pretty = true
sqlite_cache = true
exclude = "pyaerocom-tutorials|_build"
[[tool.mypy.overrides]]
module = [
"cartopy.*",
"iris.*",
"matplotlib.*",
"geonum.*",
"geopy.*",
"scipy.*",
"mpl_toolkits.*",
"cf_units",
"geojsoncontour",
"pandas",
"dask",
"seaborn",
"openpyxl",
"tqdm",
"coda",
]
ignore_missing_imports = true
[tool.pylint.messages_control]
disable = "C0330, C0326"
[tool.pylint.format]
max-line-length = 99
[tool.tox]
legacy_tox_ini = """
[tox]
envlist = py310, py311, py312, lint, type-check, docs, build
skip_missing_interpreters = True
isolated_build = True
requires =
setuptools >=40.6.0,<=60.9.3
cython > 0.29.15
[testenv]
commands_pre =
python --version
python -m pip freeze --all
commands =
python -m pytest -ra -q {posargs:--cov --no-cov-on-fail}
extras =
test
setenv =
UDUNITS2_XML_PATH=/usr/share/xml/udunits/udunits2-common.xml
deps =
scitools-iris ==3.8.1; python_version < "3.11"
cartopy ==0.21.1; python_version < "3.11"
matplotlib ==3.7.1; python_version < "3.11"
scipy ==1.10.1; python_version < "3.11"
numpy ==1.24.4; python_version < "3.11"
seaborn ==0.12.2; python_version < "3.11"
geonum ==1.5.0; python_version < "3.11"
typer ==0.7.0; python_version < "3.11"
tomli ==2.0.1; python_version < "3.11"
importlib-resources ==5.10; python_version < "3.11"
typing-extensions ==4.6.1; python_version < "3.11"
cf-units ==3.1; python_version < "3.11"
pydantic ==2.7.1; python_version < "3.11"
pyaro == 0.0.10; python_version < "3.11"
pooch ==1.7.0; python_version < "3.11"
xarray ==2022.12.0; python_version < "3.11"
pandas ==1.5.3; python_version < "3.11"
[testenv:lint]
skip_install = True
commands =
pre-commit run --all-files --show-diff-on-failure
deps =
pre-commit
[testenv:type-check]
ignore_outcome = True
commands =
mypy pyaerocom/
extras =
lint
[testenv:docs]
commands =
sphinx-build {posargs:-T} docs/ docs/_build/html
extras =
docs
[testenv:build]
commands =
python -m build
deps =
build
"""