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requirements.txt
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requirements.txt
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# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
_libgcc_mutex=0.1=conda_forge
_openmp_mutex=4.5=2_kmp_llvm
absl-py=0.12.0=pypi_0
aiohttp=3.6.2=pypi_0
aiohttp-cors=0.7.0=pypi_0
aioredis=1.3.1=pypi_0
argon2-cffi=20.1.0=pypi_0
astunparse=1.6.3=pypi_0
async-timeout=3.0.1=pypi_0
attrs=19.3.0=pypi_0
backcall=0.2.0=pypi_0
beautifulsoup4=4.9.1=pypi_0
biopython=1.78=pypi_0
blas=1.0=mkl
bleach=3.1.5=pypi_0
blessings=1.7=pypi_0
boost=1.78.0=py37h48bf904_0
boost-cpp=1.78.0=he72f1d9_0
boto3=1.16.19=pypi_0
botocore=1.19.19=pypi_0
botorch=0.3.3=pypi_0
bottleneck=1.3.5=py37h7deecbd_0
brotli=1.0.9=h5eee18b_7
brotli-bin=1.0.9=h5eee18b_7
brotlipy=0.7.0=py37h27cfd23_1003
bzip2=1.0.8=h7b6447c_0
ca-certificates=2023.01.10=h06a4308_0
cachetools=4.1.1=pypi_0
cairo=1.16.0=h19f5f5c_2
certifi=2020.6.20=pypi_0
cffi=1.15.1=py37h5eee18b_3
chardet=3.0.4=pypi_0
charset-normalizer=2.0.4=pyhd3eb1b0_0
click=7.1.2=pypi_0
cloudpickle=1.3.0=pypi_0
cma=3.0.3=pypi_0
colorama=0.4.3=pypi_0
colorful=0.5.4=pypi_0
conda=23.1.0=py37h06a4308_0
conda-package-handling=2.0.2=py37h06a4308_0
conda-package-streaming=0.7.0=py37h06a4308_0
cryptography=38.0.4=py37h9ce1e76_0
cudatoolkit=10.1.243=h6bb024c_0
cudnn=7.6.5=cuda10.1_0
cycler=0.10.0=pypi_0
cython=0.29.21=pypi_0
decorator=4.4.2=pypi_0
deepchem=2.5.0=pypi_0
defusedxml=0.6.0=pypi_0
design-baselines=0.1=dev_0
design-bench=2.0.20=pypi_0
dm-tree=0.1.5=pypi_0
docker=4.3.0=pypi_0
entrypoints=0.3=pypi_0
expat=2.4.9=h6a678d5_0
fast-ctc-decode=0.3.0=pypi_0
fasteners=0.16=pypi_0
filelock=3.0.12=pypi_0
flatbuffers=1.12=pypi_0
flit-core=3.6.0=pyhd3eb1b0_0
fontconfig=2.14.0=h8e229c2_0
fonttools=4.25.0=pyhd3eb1b0_0
freetype=2.12.1=h4a9f257_0
future=0.18.2=pypi_0
gast=0.3.3=pypi_0
giflib=5.2.1=h5eee18b_1
glfw=1.12.0=pypi_0
glib=2.69.1=he621ea3_2
google=3.0.0=pypi_0
google-api-core=1.22.2=pypi_0
google-auth=1.21.3=pypi_0
google-auth-oauthlib=0.4.1=pypi_0
google-pasta=0.2.0=pypi_0
googleapis-common-protos=1.52.0=pypi_0
gpustat=0.6.0=pypi_0
gpytorch=1.3.0=pypi_0
greenlet=2.0.1=py37h6a678d5_0
grpcio=1.32.0=pypi_0
gym=0.12.5=pypi_0
h5py=2.10.0=pypi_0
higher=0.2.1=pypi_0
hiredis=1.1.0=pypi_0
huggingface-hub=0.0.8=pypi_0
icu=70.1=h27087fc_0
idna=2.10=pypi_0
imageio=2.9.0=pypi_0
importlib-metadata=1.7.0=pypi_0
importlib_metadata=4.11.3=hd3eb1b0_0
intel-openmp=2021.4.0=h06a4308_3561
ipdb=0.13.4=pypi_0
ipykernel=5.3.4=pypi_0
ipython=7.17.0=pypi_0
ipython-genutils=0.2.0=pypi_0
ipywidgets=7.5.1=pypi_0
jedi=0.17.2=pypi_0
jinja2=2.11.2=pypi_0
jmespath=0.10.0=pypi_0
joblib=1.0.0=pypi_0
jpeg=9e=h7f8727e_0
jsonschema=3.2.0=pypi_0
jupyter=1.0.0=pypi_0
jupyter-client=6.1.6=pypi_0
jupyter-console=6.1.0=pypi_0
jupyter-core=4.6.3=pypi_0
keras-preprocessing=1.1.2=pypi_0
kiwisolver=1.2.0=pypi_0
lcms2=2.12=h3be6417_0
ld_impl_linux-64=2.38=h1181459_1
lerc=3.0=h295c915_0
libbrotlicommon=1.0.9=h5eee18b_7
libbrotlidec=1.0.9=h5eee18b_7
libbrotlienc=1.0.9=h5eee18b_7
libdeflate=1.8=h7f8727e_5
libffi=3.4.2=h6a678d5_6
libgcc-ng=12.2.0=h65d4601_19
libpng=1.6.37=hbc83047_0
libstdcxx-ng=12.2.0=h46fd767_19
libtiff=4.5.0=hecacb30_0
libuuid=2.32.1=h7f98852_1000
libwebp=1.2.4=h11a3e52_0
libwebp-base=1.2.4=h5eee18b_0
libxcb=1.15=h7f8727e_0
llvm-openmp=14.0.6=h9e868ea_0
lmdb=1.0.0=pypi_0
lockfile=0.12.2=pypi_0
lz4-c=1.9.4=h6a678d5_0
mappy=2.24=pypi_0
markdown=3.2.2=pypi_0
markupsafe=1.1.1=pypi_0
matplotlib=3.3.0=pypi_0
mistune=0.8.4=pypi_0
mkl=2021.4.0=h06a4308_640
mkl-service=2.4.0=py37h7f8727e_0
mkl_fft=1.3.1=py37hd3c417c_0
mkl_random=1.2.2=py37h51133e4_0
morphing-agents=1.5.1=pypi_0
msgpack=1.0.0=pypi_0
mujoco-py=2.0.2.3=pypi_0
multidict=4.7.6=pypi_0
munkres=1.1.4=py_0
nbconvert=5.6.1=pypi_0
nbformat=5.0.7=pypi_0
ncurses=6.4=h6a678d5_0
notebook=6.1.1=pypi_0
numexpr=2.8.4=py37he184ba9_0
numpy=1.19.5=pypi_0
nvidia-ml-py3=7.352.0=pypi_0
oauthlib=3.1.0=pypi_0
onnx=1.13.0=pypi_0
onnxruntime=1.10.0=pypi_0
ont-bonito-cuda111=0.5.1=pypi_0
ont-fast5-api=3.3.0=pypi_0
ont-koi=0.0.7=pypi_0
ont-remora=0.1.2=pypi_0
opencensus=0.7.10=pypi_0
opencensus-context=0.1.1=pypi_0
openssl=1.1.1s=h7f8727e_0
opt-einsum=3.3.0=pypi_0
packaging=20.4=pypi_0
pandas=1.1.5=pypi_0
pandocfilters=1.4.2=pypi_0
parasail=1.2=pypi_0
parso=0.7.1=pypi_0
pcre=8.45=h295c915_0
pexpect=4.8.0=pypi_0
pickleshare=0.7.5=pypi_0
pillow=7.2.0=pypi_0
pip=22.3.1=py37h06a4308_0
pixman=0.40.0=h7f8727e_1
pluggy=1.0.0=py37h06a4308_1
progressbar33=2.4=pypi_0
prometheus-client=0.8.0=pypi_0
prompt-toolkit=3.0.6=pypi_0
protobuf=3.20.3=pypi_0
psutil=5.7.2=pypi_0
ptyprocess=0.6.0=pypi_0
py-spy=0.3.3=pypi_0
pyasn1=0.4.8=pypi_0
pyasn1-modules=0.2.8=pypi_0
pycairo=1.21.0=py37h287db57_0
pycosat=0.6.3=pypi_0
pycparser=2.21=pyhd3eb1b0_0
pyglet=1.5.0=pypi_0
pygments=2.6.1=pypi_0
pyopenssl=22.0.0=pyhd3eb1b0_0
pyparsing=2.4.7=pypi_0
pyrsistent=0.16.0=pypi_0
pysam=0.18.0=pypi_0
pysocks=1.7.1=py37_1
python=3.7.16=h7a1cb2a_0
python-dateutil=2.8.2=pypi_0
python_abi=3.7=2_cp37m
pytz=2020.1=pypi_0
pyyaml=5.3.1=pypi_0
pyzmq=19.0.2=pypi_0
qtconsole=4.7.5=pypi_0
qtpy=1.9.0=pypi_0
ray=1.3.0=pypi_0
rdkit=2022.09.1=py37h97e29ec_1
readline=8.2=h5eee18b_0
redis=3.5.3=pypi_0
regex=2021.4.4=pypi_0
reportlab=3.5.67=py37hfdd840d_1
requests=2.25.1=pypi_0
requests-oauthlib=1.3.0=pypi_0
robel=0.1.2=pypi_0
rsa=4.6=pypi_0
ruamel-yaml=0.15.87=pypi_0
ruamel.yaml.clib=0.2.6=py37h5eee18b_1
s3transfer=0.3.3=pypi_0
sacremoses=0.0.45=pypi_0
scikit-learn=0.23.1=pypi_0
scikit-video=1.1.11=pypi_0
scipy=1.5.4=pypi_0
seaborn=0.11.0=pypi_0
send2trash=1.5.0=pypi_0
sentencepiece=0.1.91=pypi_0
setuptools=65.6.3=py37h06a4308_0
six=1.15.0=pypi_0
soupsieve=2.0.1=pypi_0
sqlalchemy=1.4.39=py37h5eee18b_0
sqlite=3.40.1=h5082296_0
tabulate=0.8.7=pypi_0
tensorboard=2.5.0=pypi_0
tensorboard-data-server=0.6.1=pypi_0
tensorboard-plugin-wit=1.7.0=pypi_0
tensorboardx=2.1=pypi_0
tensorflow=2.4.1=pypi_0
tensorflow-estimator=2.4.0=pypi_0
tensorflow-probability=0.11.0=pypi_0
termcolor=1.1.0=pypi_0
terminado=0.8.3=pypi_0
testpath=0.4.4=pypi_0
thop=0.1.1-2209072238=pypi_0
threadpoolctl=2.1.0=pypi_0
tk=8.6.12=h1ccaba5_0
tokenizers=0.9.3=pypi_0
toml=0.10.2=pypi_0
toolz=0.12.0=py37h06a4308_0
torch=1.7.1+cu110=pypi_0
torchvision=0.8.2=pypi_0
tornado=6.0.4=pypi_0
tqdm=4.31.1=pypi_0
traitlets=4.3.3=pypi_0
transformers=3.5.1=pypi_0
transforms3d=0.3.1=pypi_0
typing-extensions=3.7.4.3=pypi_0
urllib3=1.26.14=py37h06a4308_0
wcwidth=0.2.5=pypi_0
webencodings=0.5.1=pypi_0
websocket-client=0.57.0=pypi_0
werkzeug=1.0.1=pypi_0
wheel=0.37.1=pyhd3eb1b0_0
widgetsnbextension=3.5.1=pypi_0
wrapt=1.12.1=pypi_0
xz=5.2.10=h5eee18b_1
yarl=1.4.2=pypi_0
zipp=3.1.0=pypi_0
zlib=1.2.13=h5eee18b_0
zstandard=0.18.0=py37h5eee18b_0
zstd=1.5.2=ha4553b6_0