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pytest.yaml
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name: pytest
concurrency:
group: ${{ github.workflow }}-${{ github.event.number }}-${{ github.event.ref }}
cancel-in-progress: true
on: # yamllint disable-line rule:truthy
pull_request:
push:
branches: [main]
workflow_dispatch:
jobs:
pytest:
timeout-minutes: 30
strategy:
fail-fast: false
matrix:
os: [ubuntu, macos, windows]
python-version: [3.9, "3.10", "3.11", "3.12"]
name: ${{ matrix.os }} - py${{ matrix.python-version }}
runs-on: ${{ matrix.os }}-latest
defaults:
run:
shell: bash
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Setup Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install system dependencies
uses: ./.github/actions/install-system-dependencies
- name: Install uv and package
run: |
python -m pip install --quiet uv
uv pip install --quiet --system .[test]
- name: Display system information
run: mne-lsl sys-info --developer
- name: Get testing dataset
uses: ./.github/actions/get-testing-dataset
- name: Run pytest
uses: ./.github/actions/retry-step
with:
command: pytest mne_lsl --cov=mne_lsl --cov-report=xml --cov-config=pyproject.toml -s
retry_error_codes: "3,134,139"
env:
MNE_LSL_LOG_LEVEL: DEBUG
- name: Upload to codecov
uses: codecov/codecov-action@v4
with:
files: ./coverage.xml
flags: unittests # optional
name: codecov-umbrella # optional
fail_ci_if_error: false # optional (default = false)
token: ${{ secrets.CODECOV_TOKEN }}
verbose: true # optional (default = false)
pytest-pip-pre:
timeout-minutes: 30
strategy:
fail-fast: false
matrix:
python-version: ["3.11"]
name: pip pre-release - py${{ matrix.python-version }}
runs-on: ubuntu-latest
defaults:
run:
shell: bash
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Setup Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install system dependencies
uses: ./.github/actions/install-system-dependencies
- name: Install uv and package
run: |
python -m pip install --quiet uv
uv pip install --quiet --system .[test]
uv pip install --quiet --system --upgrade git+https://github.com/mne-tools/mne-python
uv pip install --quiet --system matplotlib
uv pip install --quiet --system --upgrade --prerelease allow --only-binary :all: -i https://pypi.anaconda.org/scientific-python-nightly-wheels/simple --no-deps matplotlib
uv pip install --quiet --system --upgrade --prerelease allow --only-binary :all: -i https://pypi.anaconda.org/scientific-python-nightly-wheels/simple numpy scipy
- name: Display system information
run: mne-lsl sys-info --developer
- name: Get testing dataset
uses: ./.github/actions/get-testing-dataset
- name: Run pytest
uses: ./.github/actions/retry-step
with:
command: pytest mne_lsl --cov=mne_lsl --cov-report=xml --cov-config=pyproject.toml -s
retry_error_codes: "3,134,139"
env:
MNE_LSL_LOG_LEVEL: DEBUG
- name: Upload to codecov
uses: codecov/codecov-action@v4
with:
files: ./coverage.xml
flags: unittests # optional
name: codecov-umbrella # optional
fail_ci_if_error: false # optional (default = false)
token: ${{ secrets.CODECOV_TOKEN }}
verbose: true # optional (default = false)
pytest-compat:
timeout-minutes: 30
strategy:
fail-fast: false
matrix:
mne-version: ["1.4.2", "1.5.0"]
python-version: [3.9]
name: mne compat ${{ matrix.mne-version }} - py${{ matrix.python-version }}
runs-on: ubuntu-latest
defaults:
run:
shell: bash
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Setup Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install system dependencies
uses: ./.github/actions/install-system-dependencies
- name: Install uv and package
run: |
python -m pip install --quiet uv
uv pip install --quiet --system .[test]
python -m pip uninstall numpy mne -y
uv pip install --quiet --system "numpy<2"
uv pip install --quiet --system mne==${{ matrix.mne-version }}
- name: Display system information
run: mne-lsl sys-info --developer
- name: Get testing dataset
uses: ./.github/actions/get-testing-dataset
- name: Run pytest
uses: ./.github/actions/retry-step
with:
command: pytest mne_lsl --cov=mne_lsl --cov-report=xml --cov-config=pyproject.toml -s
retry_error_codes: "3,134,139"
env:
MNE_LSL_LOG_LEVEL: DEBUG
- name: Upload to codecov
uses: codecov/codecov-action@v4
with:
files: ./coverage.xml
flags: unittests # optional
name: codecov-umbrella # optional
fail_ci_if_error: false # optional (default = false)
token: ${{ secrets.CODECOV_TOKEN }}
verbose: true # optional (default = false)