diff --git a/pom.xml b/pom.xml
index d45f358cc..2600be0f7 100644
--- a/pom.xml
+++ b/pom.xml
@@ -9,7 +9,7 @@
org.embl.mobie
mobie-viewer-fiji
- 5.3.2-SNAPSHOT
+ 5.3.4-SNAPSHOT
diff --git a/src/test/java/projects/bacteria_halo_quantification/BacteriaHaloQuantification.java b/src/test/java/projects/bacteria_halo_quantification/BacteriaHaloQuantification.java
index f413f1d6a..0daf433ba 100644
--- a/src/test/java/projects/bacteria_halo_quantification/BacteriaHaloQuantification.java
+++ b/src/test/java/projects/bacteria_halo_quantification/BacteriaHaloQuantification.java
@@ -1,6 +1,7 @@
package projects.bacteria_halo_quantification;
import net.imagej.ImageJ;
+import org.embl.mobie.command.open.OpenImageAndLabelsCommand;
import org.embl.mobie.command.open.OpenMultipleImagesAndLabelsCommand;
import java.io.File;
@@ -11,15 +12,11 @@ public static void main( String[] args )
{
new ImageJ().ui().showUI();
- OpenMultipleImagesAndLabelsCommand command = new OpenMultipleImagesAndLabelsCommand();
-
+ OpenImageAndLabelsCommand command = new OpenImageAndLabelsCommand();
String root = "/Users/tischer/Documents/bacteria-halo-quantification-data/many_images_output/";
- //String root = "/Users/tischer/Documents/bacteria-halo-quantification-data/few_images_output/";
- command.image0 = new File( root + ".*_intensities.tiff" );
- //command.image1 = new File( root + ".*_bg_mask.tiff" );
-
- command.labels0 = new File( root + ".*_halo_labels.tiff" );
- command.table0 = new File( root + ".*_measurements.csv" );
+ command.image = new File( root + ".*_intensities.tiff" );
+ command.labels = new File( root + ".*_halo_labels.tiff" );
+ command.table = new File( root + ".*_measurements.csv" );
command.run();
}
diff --git a/src/test/resources/collections/blobs-grid-table.txt b/src/test/resources/collections/blobs-grid-table.txt
new file mode 100644
index 000000000..08eb14a3b
--- /dev/null
+++ b/src/test/resources/collections/blobs-grid-table.txt
@@ -0,0 +1,5 @@
+uri type affine color view labels_table
+blobs.tif intensities (10,0,0,0,0,10,0,0,0,0,1,0) grid_intensities
+blobs-labels.tif labels (10,0,0,0,0,10,0,0,0,0,1,0) grid_labels blobs-labels.csv
+blobs2.tif intensities (10,0,0,0,0,10,0,0,0,0,1,0) grid_intensities
+blobs2-labels.tif labels (10,0,0,0,0,10,0,0,0,0,1,0) grid_labels blobs2-labels.csv
\ No newline at end of file