From fca57e4f50d011937b5c01ed71c3e888f86f2222 Mon Sep 17 00:00:00 2001 From: AlessioMilanese Date: Sat, 25 Mar 2023 18:03:17 +0100 Subject: [PATCH 1/2] do changes to have database 3.1 --- motus/downloadDB.py | 6 +++--- setup.py | 4 ++-- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/motus/downloadDB.py b/motus/downloadDB.py index 558db93..86bebd0 100644 --- a/motus/downloadDB.py +++ b/motus/downloadDB.py @@ -17,9 +17,9 @@ # # ============================================================================ # -motus_version = "3.0.3" -link_db = "https://zenodo.org/record/5140350/files/db_mOTU_v3.0.1.tar.gz" -md5_db = "f4fd09fad9b311fb4f21383f6101bfc3" +motus_version = "3.1.0" +link_db = "https://sunagawalab.ethz.ch/share/TEMP_MOTUS_DB/db_mOTU_v3.1.0.tar.gz" +md5_db = "f841c36150025af837f7a9a358c9a3c3" DOI_db = "10.5281/zenodo.5140350" diff --git a/setup.py b/setup.py index d386550..1fbd3fc 100644 --- a/setup.py +++ b/setup.py @@ -8,7 +8,7 @@ def read(fname): long_description = read('README.md') setup( name = "motu-profiler", - version = "3.0.3", + version = "3.1.0", author = "Alessio Milanese", author_email = "alessiom@ethz.ch", description = ("Taxonomic profiling of metagenomes from diverse environments with mOTUs3"), @@ -19,7 +19,7 @@ def read(fname): keywords = "bioinformatics metagenomics taxonomic profiling", url = "https://github.com/motu-tool/mOTUs", packages=['motus'], - download_url = "https://github.com/motu-tool/mOTUs/archive/refs/tags/3.0.3.tar.gz", + download_url = "https://github.com/motu-tool/mOTUs/archive/refs/tags/3.1.0.tar.gz", classifiers=[ 'Programming Language :: Python', 'Programming Language :: Python :: 3', From 1fa4838cfc8e5f2449de1b967dcbd414ec066592 Mon Sep 17 00:00:00 2001 From: AlessioMilanese Date: Tue, 28 Mar 2023 15:04:54 +0200 Subject: [PATCH 2/2] set the database 3.1 on zenodo --- motus/downloadDB.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/motus/downloadDB.py b/motus/downloadDB.py index 86bebd0..5a834ab 100644 --- a/motus/downloadDB.py +++ b/motus/downloadDB.py @@ -18,9 +18,9 @@ # ============================================================================ # motus_version = "3.1.0" -link_db = "https://sunagawalab.ethz.ch/share/TEMP_MOTUS_DB/db_mOTU_v3.1.0.tar.gz" +link_db = "https://zenodo.org/record/7778108/files/db_mOTU_v3.1.0.tar.gz" md5_db = "f841c36150025af837f7a9a358c9a3c3" -DOI_db = "10.5281/zenodo.5140350" +DOI_db = "10.5281/zenodo.7778108"