DESCRIPTION

Package: R.4Cker
Title: Analysis of 4C-seq (circularized chromosome conformation capture) data
Version: 0.0.0.9000
Authors@R: c(person("Ramya", "Raviram", email="ravirr01@nyumc.org", role = c("aut", "cre")),
  person("Pedro", "Rocha", email="pedro.pereiradarocha@nyumc.org", role = c("aut")),
  person("Christian","Mueller", email = "cmueller@simonsfoundation.org", role = c("aut")),
  person("Emily","Miraldi", email = "emiraldi@nyu.edu", role = c("aut")),
  person("Sana","Badri", email = "sana.badri@nyumc.org", role = c("aut")),
  person("Yi","Fu", email = "yi.fu@nyumc.org", role = c("aut")),
  person("Emily","Swanzey", email = "emily.swanzey@nyu", role = c("aut")),
  person("Charlotte","Proudhon", email = "charlotte.proudhon@nyumc.org", role = c("aut")),
  person("Valentina","Snetkova", email = "valentina.snetkova@nyumc.org", role = c("aut")),
  person("Richard","Bonneau", email = "rb133@nyu.edu", role = c("aut")),
  person("Jane","Skok", email = "jane.skok@nyumc.org", role = c("aut")))
Description: A method to identify domains interacting with a 4C-Seq bait in cis and trans.
Depends: R (>= 3.1.2)
License: What license is it under?
LazyData: true
Imports:
  depmixS4,
  DESeq2,
  MASS,
  miscTools,
  psych,
  RColorBrewer,
  ggplot2