diff --git a/conf/test_full.config b/conf/test_full.config index 52781925..0b028c4c 100644 --- a/conf/test_full.config +++ b/conf/test_full.config @@ -28,3 +28,12 @@ params { umi_start = 0 umi_position = 'R1' } + +process { + withName:DOWSER_LINEAGES{ + ext.args = ['build':'igphyml', + 'minseq':5, + 'traits':'c_primer', + 'tips':'c_primer'] + } +} diff --git a/modules/local/enchantr/dowser_lineages.nf b/modules/local/enchantr/dowser_lineages.nf index 7db286d0..7f173c37 100644 --- a/modules/local/enchantr/dowser_lineages.nf +++ b/modules/local/enchantr/dowser_lineages.nf @@ -24,7 +24,7 @@ process DOWSER_LINEAGES { conda "bioconda::r-enchantr=0.1.3" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'docker.io/ssnn/suite:prerelease': - 'docker.io/immcantation/suite:devel' }" + 'docker.io/ssnn/suite:prerelease' }" input: tuple val(meta), path(tabs)