diff --git a/CHANGELOG.md b/CHANGELOG.md index 3484b265..755f0d29 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -3,6 +3,16 @@ The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/) and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.html). +## [3.2.1dev] - + +### `Added` + +### `Fixed` + +- Removed optional output from FilterQuality to not fail silently + +### `Dependencies` + ## [3.2.0] - 2023-10-27 Expecto patronum ### `Added` diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml index b54b1946..52ed38e2 100644 --- a/assets/multiqc_config.yml +++ b/assets/multiqc_config.yml @@ -1,5 +1,5 @@ report_comment: - This report has been generated by the nf-core/airrflow + This report has been generated by the nf-core/airrflow analysis pipeline. For information about how to interpret these results, please see the documentation. diff --git a/modules/local/reveal/filter_quality.nf b/modules/local/reveal/filter_quality.nf index a20d029e..abd71995 100644 --- a/modules/local/reveal/filter_quality.nf +++ b/modules/local/reveal/filter_quality.nf @@ -14,7 +14,7 @@ process FILTER_QUALITY { tuple val(meta), path(tab) // sequence tsv in AIRR format output: - tuple val(meta), path("*quality-pass.tsv"), optional:true, emit: tab // sequence tsv in AIRR format + tuple val(meta), path("*quality-pass.tsv"), emit: tab // sequence tsv in AIRR format path("*_command_log.txt"), emit: logs //process logs path "versions.yml", emit: versions diff --git a/nextflow.config b/nextflow.config index 1b772655..9fcbed9d 100644 --- a/nextflow.config +++ b/nextflow.config @@ -329,7 +329,7 @@ manifest { description = """B and T cell repertoire analysis pipeline with the Immcantation framework.""" mainScript = 'main.nf' nextflowVersion = '!>=23.04.0' - version = '3.2.0' + version = '3.2.1dev' doi = '10.5281/zenodo.2642009' }