diff --git a/modules/local/ciriquant/yml/main.nf b/modules/local/ciriquant/yml/main.nf index 4eb2d06f..89c7048f 100644 --- a/modules/local/ciriquant/yml/main.nf +++ b/modules/local/ciriquant/yml/main.nf @@ -19,7 +19,7 @@ process CIRIQUANT_YML { task.ext.when == null || task.ext.when script: - hisat2_prefix = meta2.id + hisat2_prefix = fasta.baseName fasta_path = fasta.toRealPath() gtf_path = gtf.toRealPath() bwa_path = bwa.toRealPath()