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What is the status of the test_full? #81

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maxulysse opened this issue Jan 9, 2023 · 4 comments
Open

What is the status of the test_full? #81

maxulysse opened this issue Jan 9, 2023 · 4 comments
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enhancement Improvement for existing functionality

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@maxulysse
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Description of feature

Hi,
Was looking into test_full profile vs test, and it lloks like the flowcell is the same.
Is there a plan for a real test_full?
Also https://raw.githubusercontent.com/nf-core/test-datasets/demultiplex/testdata/MiSeq/SampleSheet.csv doesn't seem like proper csv to me.

@maxulysse maxulysse added the enhancement Improvement for existing functionality label Jan 9, 2023
@matthdsm
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We're going to have to find someone who's willing (and able) to share a full size flowcell for both Illumina and Aviti.
I'd love to submit something, but I'm not really allowed to share my data

@blajoie
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blajoie commented Mar 1, 2023

I can look into sharing a full flowcell for AVITI. We also have simulate run folders that can be used for smaller tests.

@Aratz
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Aratz commented Oct 23, 2023

For Illumina, I guess it would be possible to use one of the demo datasets from BaseSpace?

@blajoie
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blajoie commented Oct 23, 2023

p.s. if this is still needed we (elembio) can share a full AVITI run. Total size is roughly 200G. We can host publicly in aws s3 so that anyone could use.

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4 participants