diff --git a/subworkflows/local/differential/main.nf b/subworkflows/local/differential/main.nf index 9be8480b..e536f619 100644 --- a/subworkflows/local/differential/main.nf +++ b/subworkflows/local/differential/main.nf @@ -116,8 +116,8 @@ workflow DIFFERENTIAL { LIMMA_DIFFERENTIAL(ch_limma.input1, ch_limma.input2) // filter results - ch_logfc = Channel.value([ params.differential_fc_column, params.differential_min_fold_change ]) - ch_padj = Channel.value([ params.differential_qval_column, params.differential_max_qval ]) + ch_logfc = Channel.value([ "logFC", params.differential_min_fold_change ]) + ch_padj = Channel.value([ "adj.P.Val", params.differential_max_qval ]) FILTER_DIFFTABLE_LIMMA( LIMMA_DIFFERENTIAL.out.results, ch_logfc,