From b71c74c7fe1f993e6f4eb05f6d573b3ce5307530 Mon Sep 17 00:00:00 2001 From: KamilMaliszArdigen <32459801+KamilMaliszArdigen@users.noreply.github.com> Date: Fri, 25 Oct 2024 10:53:28 +0200 Subject: [PATCH] Update workflows/differentialabundance.nf Co-authored-by: Jonathan Manning --- workflows/differentialabundance.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/workflows/differentialabundance.nf b/workflows/differentialabundance.nf index a85f3e3b..aef14782 100644 --- a/workflows/differentialabundance.nf +++ b/workflows/differentialabundance.nf @@ -637,7 +637,7 @@ workflow DIFFERENTIALABUNDANCE { def params_pattern = "report|gene_sets|study|observations|features|filtering|exploratory|differential" if (params.study_type == 'rnaseq'){ if (params.differential_use_limma){ - params_pattern += "|lima" + params_pattern += "|limma" } else { params_pattern += "|deseq2" }