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Merqury inputs should include the meryl db (created from reads), and the assembly.
genomeqc/modules/nf-core/merqury/merqury/main.nf
Lines 11 to 12 in 5e5f897
Typo in the current implementation that joins to the reads (fasta), not the assembly.
genomeqc/workflows/genomeqc.nf
Lines 127 to 129 in 5e5f897
Need to change this to fasta, not fastq.
Also need to change this in the subworkflow nf-core/modules#6905
The text was updated successfully, but these errors were encountered:
TODOs for fasta see nf-core/genomeqc#75
1feec97
join merqury input to fasta not fastq fixes nf-core#75
00789d9
stephenturner
Successfully merging a pull request may close this issue.
Merqury inputs should include the meryl db (created from reads), and the assembly.
genomeqc/modules/nf-core/merqury/merqury/main.nf
Lines 11 to 12 in 5e5f897
Typo in the current implementation that joins to the reads (fasta), not the assembly.
genomeqc/workflows/genomeqc.nf
Lines 127 to 129 in 5e5f897
Need to change this to fasta, not fastq.
Also need to change this in the subworkflow nf-core/modules#6905
The text was updated successfully, but these errors were encountered: