diff --git a/CHANGELOG.md b/CHANGELOG.md index 76ac357c..d9c81bd1 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -3,12 +3,12 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). -## dev [unreleased] +## 3.1.0 [2024-10-02] ### `Added` - [#665](https://github.com/nf-core/mag/pull/648) - Add support for supplying pre-made bowtie host reference index (requested by @simone-pignotti, added by @jfy133) -- [#670](https://github.com/nf-core/mag/pull/670) - Added --gtdbtk_pplacer_useram to run GTDBTk in memory mode rather than write to disk (reported by @harper357, fixed by @jfy133) +- [#670](https://github.com/nf-core/mag/pull/670) - Added --gtdbtk_pplacer_useram to run GTDBTk in memory mode rather than write to disk (requested by @harper357, fixed by @jfy133) ### `Changed` diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml index 9f4e5e7e..8dcc79aa 100644 --- a/assets/multiqc_config.yml +++ b/assets/multiqc_config.yml @@ -1,7 +1,7 @@ report_comment: > - This report has been generated by the nf-core/mag + This report has been generated by the nf-core/mag analysis pipeline. For information about how to interpret these results, please see the - documentation. + documentation. report_section_order: "nf-core-mag-methods-description": order: -1000 diff --git a/nextflow.config b/nextflow.config index 3b43df33..2ea9d994 100644 --- a/nextflow.config +++ b/nextflow.config @@ -95,7 +95,7 @@ params { gtdbtk_min_perc_aa = 10 gtdbtk_min_af = 0.65 gtdbtk_pplacer_cpus = 1 - gtdbtk_pplacer_useram = false + gtdbtk_pplacer_useram = false // long read preprocessing options skip_adapter_trimming = false @@ -391,7 +391,7 @@ manifest { description = """Assembly, binning and annotation of metagenomes""" mainScript = 'main.nf' nextflowVersion = '!>=23.04.0' - version = '3.0.4dev' + version = '3.1.0' doi = '10.1093/nargab/lqac007' }