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Update metaspades to 4.0.0 #640

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elsherbini opened this issue Jul 24, 2024 · 1 comment · Fixed by #666
Open

Update metaspades to 4.0.0 #640

elsherbini opened this issue Jul 24, 2024 · 1 comment · Fixed by #666
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@elsherbini
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Description of the bug

Bioconda recipe currently broken for SPAdes 3.15.5, updated to 4.0.0 is reported to fix the issue. Discussed on slack in this thread: https://nfcore.slack.com/archives/CE9MS66BS/p1721298005029789

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@elsherbini elsherbini added the bug Something isn't working label Jul 24, 2024
@jfy133 jfy133 added enhancement New feature or request bug Something isn't working and removed bug Something isn't working enhancement New feature or request labels Aug 21, 2024
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jfy133 commented Sep 3, 2024

OK I did a mini test for both normal and hybrid spades using our test-data and the differences are minimal in our default tests, so I think this is fine to do :)

I'll try to do it soon

@jfy133 jfy133 linked a pull request Sep 9, 2024 that will close this issue
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@jfy133 jfy133 self-assigned this Sep 18, 2024
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