diff --git a/.nf-core.yml b/.nf-core.yml
index 5d193256..f945d00c 100644
--- a/.nf-core.yml
+++ b/.nf-core.yml
@@ -18,5 +18,5 @@ template:
org: nf-core
outdir: .
skip_features: null
- version: 3.2.0
+ version: 3.2.1
update: null
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 43c68211..f7b929e3 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,6 +3,20 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
+## 3.2.1 [2024-10-30]
+
+### `Added`
+
+### `Changed`
+
+### `Fixed`
+
+- [#707](https://github.com/nf-core/mag/pull/674) - Fix missing space resulting in malformed args for MEGAHIT (reported by @d4straub, fix by @jfy133)
+
+### `Dependencies`
+
+### `Deprecated`
+
## 3.2.0 [2024-10-27]
### `Added`
diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml
index e9da7a41..434dfa7b 100644
--- a/assets/multiqc_config.yml
+++ b/assets/multiqc_config.yml
@@ -1,7 +1,7 @@
report_comment: >
- This report has been generated by the nf-core/mag
+ This report has been generated by the nf-core/mag
analysis pipeline. For information about how to interpret these results, please see the
- documentation.
+ documentation.
report_section_order:
"nf-core-mag-methods-description":
order: -1000
diff --git a/conf/modules.config b/conf/modules.config
index 0fbea292..507e475f 100644
--- a/conf/modules.config
+++ b/conf/modules.config
@@ -257,7 +257,7 @@ process {
}
withName: MEGAHIT {
- ext.args = { params.megahit_options ? params.megahit_options + "-m ${task.memory.toBytes()}" : "-m ${task.memory.toBytes()}" }
+ ext.args = { params.megahit_options ? params.megahit_options + " -m ${task.memory.toBytes()}" : "-m ${task.memory.toBytes()}" }
ext.prefix = { "MEGAHIT-${meta.id}" }
publishDir = [path: { "${params.outdir}/Assembly/MEGAHIT" }, mode: params.publish_dir_mode, pattern: "*.{fa.gz,log}"]
}
diff --git a/nextflow.config b/nextflow.config
index 026f67d8..4c5e67fa 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -375,7 +375,7 @@ manifest {
description = """Assembly, binning and annotation of metagenomes"""
mainScript = 'main.nf'
nextflowVersion = '!>=24.04.2'
- version = '3.2.0'
+ version = '3.2.1'
doi = '10.1093/nargab/lqac007'
}