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I'm unable to run the new version 1.1.0 pipeline without Internet access because it can't get the nf-validation plugin.
I have opened a question at the nextflow developers GIthub, because it should arguably be solved ih nextflow itself: nextflow-io/nextflow#4126
I'm opening a bug here in case something can be done from the pipeline or nf-core sides. Will keep looking for a solution. (I think nf-validation is cool, and hope to find a way to use it)
Command used and terminal output
bash-4.2$ /ess/p164/data/durable/raredisease/1.1.0/nextflow-23.06.0-edge-all run \
> /ess/p164/data/durable/raredisease/1.1.0/nf-core-raredisease-1.1.0/workflow \
> -c /ess/p164/data/durable/raredisease/1.1.0/medGenConfigs/process-overrides.conf \[...custom configs and parameters...]
> -resumeN E X T F L O W ~ version 23.06.0-edgeLaunching `/ess/p164/data/durable/raredisease/1.1.0/nf-core-raredisease-1.1.0/workflow/main.nf` [hungry_volhard] DSL2 - revision: b28dcce5fbWARN: Nextflow self-contained distribution allows only core plugins -- User config plugins will be ignored: nf-validationERROR ~ Cannot find latest version of nf-validation plugin -- Check script '/ess/p164/data/durable/raredisease/1.1.0/nf-core-raredisease-1.1.0/workflow/main.nf' at line: 60 or see '.nextflow.log' file for more details
Relevant files
No response
System information
No response
The text was updated successfully, but these errors were encountered:
The solution is given in the question linked above. I suppose it's reasonable to expect this of users, but would it be helpful if I wrote some usage documentation about running offline? Otherwise, feel free to close it.
Description of the bug
I'm unable to run the new version 1.1.0 pipeline without Internet access because it can't get the nf-validation plugin.
I have opened a question at the nextflow developers GIthub, because it should arguably be solved ih nextflow itself: nextflow-io/nextflow#4126
I'm opening a bug here in case something can be done from the pipeline or nf-core sides. Will keep looking for a solution. (I think nf-validation is cool, and hope to find a way to use it)
Command used and terminal output
Relevant files
No response
System information
No response
The text was updated successfully, but these errors were encountered: