Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Rename the pipeline #65

Closed
fasterius opened this issue Jan 24, 2024 · 1 comment
Closed

Rename the pipeline #65

fasterius opened this issue Jan 24, 2024 · 1 comment

Comments

@fasterius
Copy link
Collaborator

fasterius commented Jan 24, 2024

Description of feature

Given the addition of other spatial-based nf-core pipelines it was decided that we should rename this pipeline to something more descriptive, since it will only be dealing with Visium data. While "spatial transcriptomics" is still used interchangeably with "Visium" it would be clearer if the pipeline name reflected the fact that it's only Visium data.

Some proposals from Slack so far:

  • visiumflow
  • nextvisium
  • visiumcore
  • visiumpipe
  • spatialseq
  • spatialflow
  • visium
@fasterius
Copy link
Collaborator Author

Completed, new pipeline name is nf-core/spatialvi.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant