title | subtitle | menu | ||||
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Getting started |
How to run your first nf-core pipeline. |
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Hi there! Many thanks for taking an interest in improving the nf-core website.
- Fork this repo
- Add your institute details and your name to the contributors.yaml
Here's the desired format
- full_name: Centre for Genomic Regulation
short_name: CRG
description: >
The Centre for Genomic Regulation (CRG) is an international biomedical research institute
of excellence, based in Barcelona, Spain, whose mission is to discover and advance knowledge
for the benefit of society and public health.
address: Carrer Dr. Aiguader, 88, 08003 Barcelona, Spain
url: http://www.crg.eu/
image_fn: CRG.svg
contact: Paolo Di Tommaso
contact_email: [email protected]
contact_github: pditommaso
location: [41.3853828, 2.191863]
twitter: CRGenomica
- For the purpose of displaying your institution logo, please also add the
SVG
of your institutions logo. These logos are displayed on the main page as well as in the community page.
Please note thatnf-co.re
website makes use of the light/dark
mode so it's recommended that you add the logo for both modes. You could make use of Adobe Illustrator/Inkscape
for converting the logo in two variants.
- The
colored SVG logo
needs to be added to the contributors-colour directory. - The
white SVG logo
needs to be added to the contributors-white directory.
If you'd like to write some code for nf-core/website, the standard workflow is as follows:
- Check that there isn't already an issue about your idea in the
nf-core/website issues to avoid
duplicating work.
- If there isn't one already, please create one so that others know you're working on this
- Fork the nf-core/website repository to your GitHub account
- Make the necessary changes / additions within your forked repository
- Submit a Pull Request against the
main
branch and wait for the code to be reviewed and merged.
If you're not used to this workflow with git, you can start with some basic docs from GitHub or even their excellent interactive tutorial.
When you create a pull request with changes, Github Actions will run automatic tests.
Typically, pull-requests are only fully reviewed when these tests are passing, though of course we can help out before then.
For now, the only test is for Markdown syntax, using the markdownlint
package.
For further information/help, please consult the nf-core/website documentation and don't hesitate to get in touch on the nf-core tools
channel on Slack.