Improved semantic graph and LLM-powered search (question-answering)

[anngvu]

What kind of question would the community most want to enable through better search?

[anngvu]

Has this mutation shown up in schwannoma or plexiforme neurofibroma?

[anngvu]

Are there any chemical compounds that look effective for XYZ cell line?

[anngvu]

What studies/data should I look at if I want to reuse data to study XYZ or talk to people who study XYZ -- based on provided abstract/description, give ranked list that personalizes results.

[anngvu]

Using Sasha's project as a test to see how well this works

[allaway]

note to self: integrate multiple data sources, publications data, uploaded metadata

will flesh this out later

[anngvu]

What tools (assays, models, etc.) have been used/made available by others that can help me design my own study that needs to look at [pain behavior, a knockout of this variant, other condition]?

[anngvu]

Especially for assays, want to be able to incorporate the descriptions and semantic meaning painstakingly maintained in the data model but not used at all in portal search at all.

[allaway]

Could also incorporate ontology information from source uri (e.g. parent info, ontology context)

[anngvu]

Questions related to data sharing governance/provenance, which might be more accessible through natural language queries than reading the docs. For example: What is the preferred open format for XYZ data type according to the NF community guidelines?

[anngvu]

Find data related to X phenotype.

[anngvu]

Layperson, more exploratory questions?