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e.g. as here nextflow-io/nextflow#922 they use the file size of a single file to specify the memory.
Something like this:
memory { sourmash_sketches.size().sum() < 100.MB ? 8.GB * task.attempt : sourmash_sketches.size() * 100.MB * task.attempt}
Use 100 MB times the summed file size, times the task attempt, otherwise use 8GB
The text was updated successfully, but these errors were encountered:
Merge pull request #1 from czbiohub/olgabot/dayhoff
55ac8a6
Add dayhoff encoding for molecule options
phoenixAja
No branches or pull requests
e.g. as here nextflow-io/nextflow#922 they use the file size of a single file to specify the memory.
Something like this:
Use 100 MB times the summed file size, times the task attempt, otherwise use 8GB
The text was updated successfully, but these errors were encountered: