import_across_membrane.yaml

pattern_name: 'import_across_membrane'

classes:
  'membrane': 'GO:0016020'
  'cellular_component': 'GO:0005575'
  'chemical entity': 'CHEBI:24431'
  'macromolecular complex': 'GO:0032991'
  'transcript': 'SO:0000673'
  'transport': 'GO:0006810'

relations:
  'transports or maintains localization of': 'RO:0002313'
  'has target start location': 'RO:0002338'
  'has target end location': 'RO:0002339'
  'results in transport across': 'RO:0002342'
  'imports': 'RO:0002340'
  
vars: 
  'membrane': "membrane"
  'cargo': "chemical entity" or "macromolecular complex" or "transcript"
  'start': "cellular_component"
  'end': "cellular_component"

# Boilerplate - don't edit
data_list_vars:
  def_xrefs: "xsd:string"
  cross_references: "xsd:string"
  exact_syn: "xsd:string"
  narrow_syn: "xsd:string"
  broad_syn: "xsd:string"
  related_syn: "xsd:string"
  
name:
  text: "%s import across %s" 
  vars:
    - 'cargo'
    - 'membrane'

def:
  text: "The directed import of %s from %s, across the %s and into the %s."
  vars:
    - 'cargo'
    - 'start'
    - 'membrane'
    - 'end'

  xrefs: # Boilerplate - don't edit
     value: def_xrefs

comment: 
  text: "This term covers %s *across* the %s through a channel or pore. It does not cover import via vesicle fusion with %s or vesiculation, as in these cases transport does not involve crossing the membrane."
  vars:
    - 'cargo'
    - 'membrane'
    - 'membrane'

# Boilerplate - don't edit
xrefs: 
   value: cross_references

namespace: 
  text: 'biological_process'

equivalentTo: 
  text: "'transport' and 'has target start location' some %s and 'has target end location' some %s and 'imports' some %s and 'results in transport across' some %s"
  vars:
    - 'start'
    - 'end'
    - 'cargo'
    - 'membrane'
    

# Boilerplate - don't edit
exact_synonyms: 
   value: exact_syn
narrow_synonyms: 
   value: narrow_syn
broad_synonyms: 
   value: broad_syn
related_synonyms: 
   value: related_syn