diff --git a/conf/application.conf b/conf/application.conf index 1c201b3..a85058e 100644 --- a/conf/application.conf +++ b/conf/application.conf @@ -23,13 +23,13 @@ ot { name = "Open Targets Genetics Portal" apiVersion { major = 1 - minor = 2 + minor = 3 patch = 0 } dataVersion { major = 21 minor = 10 - patch = 0 + patch = 3 } } } diff --git a/resources/v2g_biofeature_labels.json b/resources/v2g_biofeature_labels.json index 0a4d2fd..f1eff18 100644 --- a/resources/v2g_biofeature_labels.json +++ b/resources/v2g_biofeature_labels.json @@ -18,49 +18,68 @@ {"original_source": "jung2019", "biofeature_string": "Psoas", "label": "Psoas", "biofeature_code": "UBERON_0008450", "biofeature_ontology_term": "UBERON_0008450"} {"original_source": "jung2019", "biofeature_string": "Lymphoblastoid cell lines", "label": "Lymphoblastoid cell lines", "biofeature_code": "LYMPHOBLASTOID_CELL", "biofeature_ontology_term": ""} {"original_source": "jung2019", "biofeature_string": "Aorta", "label": "Artery aorta", "biofeature_code": "UBERON_0000947", "biofeature_ontology_term": "UBERON_0000947"} -{"original_source": "jung2019", "biofeature_string": "Spleen", "label": "spleen", "biofeature_code": "UBERON_0002106", "biofeature_ontology_term": "UBERON_0002106"} {"original_source": "jung2019", "biofeature_string": "Gastric", "label": "Gastric", "biofeature_code": "GASTRIC", "biofeature_ontology_term": ""} {"original_source": "jung2019", "biofeature_string": "Right Atrium", "label": "Right Atrium", "biofeature_code": "UBERON_0002078", "biofeature_ontology_term": "UBERON_0002078"} -{"original_source":"eqtl_catalogue_v2","study":"Alasoo_2018","biofeature_string":"macrophage_naive","biofeature_code":"MACROPHAGE_NAIVE","biofeature_ontology_term":"CL_0000235","label":"macrophage","tissue_label":"macrophage","condition_label":"naive"} -{"original_source":"eqtl_catalogue_v2","study":"Alasoo_2018","biofeature_string":"macrophage_IFNg","biofeature_code":"MACROPHAGE_IFNG","biofeature_ontology_term":"CL_0000235","label":"macrophage IFNg 18h","tissue_label":"macrophage","condition_label":"IFNg_18h"} -{"original_source":"eqtl_catalogue_v2","study":"Alasoo_2018","biofeature_string":"macrophage_Salmonella","biofeature_code":"MACROPHAGE_SALMONELLA","biofeature_ontology_term":"CL_0000235","label":"macrophage Salmonella 5h","tissue_label":"macrophage","condition_label":"Salmonella_5h"} -{"original_source":"eqtl_catalogue_v2","study":"Alasoo_2018","biofeature_string":"macrophage_IFNg+Salmonella","biofeature_code":"MACROPHAGE_IFNG+SALMONELLA","biofeature_ontology_term":"CL_0000235","label":"macrophage IFNg 18h+Salmonella 5h","tissue_label":"macrophage","condition_label":"IFNg_18h+Salmonella_5h"} -{"original_source":"eqtl_catalogue_v2","study":"BLUEPRINT","biofeature_string":"monocyte","biofeature_code":"MONOCYTE","biofeature_ontology_term":"CL_0002057","label":"monocyte","tissue_label":"monocyte","condition_label":"naive"} -{"original_source":"eqtl_catalogue_v2","study":"BLUEPRINT","biofeature_string":"neutrophil","biofeature_code":"NEUTROPHIL","biofeature_ontology_term":"CL_0000775","label":"neutrophil","tissue_label":"neutrophil","condition_label":"naive"} +{"original_source": "jung2019", "biofeature_string": "Spleen", "label": "spleen", "biofeature_code": "UBERON_0002106", "biofeature_ontology_term": "UBERON_0002106"} +{"original_source": "javierre2016", "biofeature_string": "Endothelial_precursors", "label": "Endothelial precursors", "biofeature_code": "ENDOTHELIAL_PRECURSORS"} +{"original_source": "javierre2016", "biofeature_string": "Erythroblasts", "label": "Erythroblasts", "biofeature_code": "ERYTHROBLASTS"} +{"original_source": "javierre2016", "biofeature_string": "Foetal_thymus", "label": "Foetal thymus", "biofeature_code": "FOETAL_THYMUS"} +{"original_source": "javierre2016", "biofeature_string": "Macrophages_M0", "label": "Macrophages M0", "biofeature_code": "MACROPHAGES_M0"} +{"original_source": "javierre2016", "biofeature_string": "Macrophages_M1", "label": "Macrophages M1", "biofeature_code": "MACROPHAGES_M1"} +{"original_source": "javierre2016", "biofeature_string": "Macrophages_M2", "label": "Macrophages M2", "biofeature_code": "MACROPHAGES_M2"} +{"original_source": "javierre2016", "biofeature_string": "Megakaryocytes", "label": "Megakaryocytes", "biofeature_code": "MEGAKARYOCYTES"} +{"original_source": "javierre2016", "biofeature_string": "Monocytes", "label": "Monocytes", "biofeature_code": "MONOCYTES"} +{"original_source": "javierre2016", "biofeature_string": "Naive_B", "label": "Naive B", "biofeature_code": "NAIVE_B"} +{"original_source": "javierre2016", "biofeature_string": "Naive_CD4", "label": "Naive CD4", "biofeature_code": "NAIVE_CD4"} +{"original_source": "javierre2016", "biofeature_string": "Naive_CD8", "label": "Naive CD8", "biofeature_code": "NAIVE_CD8"} +{"original_source": "javierre2016", "biofeature_string": "Neutrophils", "label": "Neutrophils", "biofeature_code": "NEUTROPHILS"} +{"original_source": "javierre2016", "biofeature_string": "Total_B", "label": "Total B", "biofeature_code": "TOTAL_B"} +{"original_source": "javierre2016", "biofeature_string": "Total_CD4_Activated", "label": "Total CD4 Activated", "biofeature_code": "TOTAL_CD4_ACTIVATED"} +{"original_source": "javierre2016", "biofeature_string": "Total_CD4_MF", "label": "Total CD4 MF", "biofeature_code": "TOTAL_CD4_MF"} +{"original_source": "javierre2016", "biofeature_string": "Total_CD4_NonActivated", "label": "Total CD4 NonActivated", "biofeature_code": "TOTAL_CD4_NONACTIVATED"} +{"original_source": "javierre2016", "biofeature_string": "Total_CD8", "label": "Total CD8", "biofeature_code": "TOTAL_CD8"} 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24h","tissue_label":"monocyte","condition_label":"IFNg_24h"} +{"original_source":"eqtl_catalogue_v2","study":"Fairfax_2014","biofeature_string":"monocyte_LPS2","biofeature_code":"MONOCYTE_LPS2","biofeature_ontology_term":"CL_0002057","label":"Monocyte LPS 2h","tissue_label":"monocyte","condition_label":"LPS_2h"} +{"original_source":"eqtl_catalogue_v2","study":"Fairfax_2014","biofeature_string":"monocyte_LPS24","biofeature_code":"MONOCYTE_LPS24","biofeature_ontology_term":"CL_0002057","label":"Monocyte LPS 24h","tissue_label":"monocyte","condition_label":"LPS_24h"} {"original_source":"eqtl_catalogue_v2","study":"GENCORD","biofeature_string":"LCL","biofeature_code":"LCL","biofeature_ontology_term":"EFO_0005292","label":"LCL","tissue_label":"LCL","condition_label":"naive"} 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{"original_source":"eqtl_catalogue_v2","study":"HipSci","biofeature_string":"iPSC","biofeature_code":"IPSC","biofeature_ontology_term":"EFO_0004905","label":"iPSC","tissue_label":"iPSC","condition_label":"naive"} {"original_source":"eqtl_catalogue_v2","study":"Kasela_2017","biofeature_string":"T-cell_CD4","biofeature_code":"T-CELL_CD4","biofeature_ontology_term":"CL_0000624","label":"CD4+ T cell","tissue_label":"CD4+ T cell","condition_label":"naive"} {"original_source":"eqtl_catalogue_v2","study":"Kasela_2017","biofeature_string":"T-cell_CD8","biofeature_code":"T-CELL_CD8","biofeature_ontology_term":"CL_0000625","label":"CD8+ T cell","tissue_label":"CD8+ T cell","condition_label":"naive"} -{"original_source":"eqtl_catalogue_v2","study":"Lepik_2017","biofeature_string":"blood","biofeature_code":"BLOOD","biofeature_ontology_term":"UBERON_0000178","label":"blood","tissue_label":"blood","condition_label":"naive"} 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+{"original_source":"eqtl_catalogue_v2","study":"Naranbhai_2015","biofeature_string":"neutrophil_CD16","biofeature_code":"NEUTROPHIL_CD16","biofeature_ontology_term":"CL_0000775","label":"Neutrophil","tissue_label":"neutrophil","condition_label":"naive"} +{"original_source":"eqtl_catalogue_v2","study":"Nedelec_2016","biofeature_string":"macrophage_Listeria","biofeature_code":"MACROPHAGE_LISTERIA","biofeature_ontology_term":"CL_0000235","label":"Macrophage Listeria 5h","tissue_label":"macrophage","condition_label":"Listeria_5h"} +{"original_source":"eqtl_catalogue_v2","study":"Nedelec_2016","biofeature_string":"macrophage_naive","biofeature_code":"MACROPHAGE_NAIVE","biofeature_ontology_term":"CL_0000235","label":"Macrophage","tissue_label":"macrophage","condition_label":"naive"} +{"original_source":"eqtl_catalogue_v2","study":"Nedelec_2016","biofeature_string":"macrophage_Salmonella","biofeature_code":"MACROPHAGE_SALMONELLA","biofeature_ontology_term":"CL_0000235","label":"Macrophage Salmonella 5h","tissue_label":"macrophage","condition_label":"Salmonella_5h"} +{"original_source":"eqtl_catalogue_v2","study":"Quach_2016","biofeature_string":"monocyte_naive","biofeature_code":"MONOCYTE_NAIVE","biofeature_ontology_term":"CL_0002057","label":"Monocyte","tissue_label":"monocyte","condition_label":"naive"} +{"original_source":"eqtl_catalogue_v2","study":"Quach_2016","biofeature_string":"monocyte_LPS","biofeature_code":"MONOCYTE_LPS","biofeature_ontology_term":"CL_0002057","label":"Monocyte LPS 6h","tissue_label":"monocyte","condition_label":"LPS_6h"} +{"original_source":"eqtl_catalogue_v2","study":"Quach_2016","biofeature_string":"monocyte_Pam3CSK4","biofeature_code":"MONOCYTE_PAM3CSK4","biofeature_ontology_term":"CL_0002057","label":"Monocyte Pam3CSK4 6h","tissue_label":"monocyte","condition_label":"Pam3CSK4_6h"} 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cell","condition_label":"naive"} {"original_source":"eqtl_catalogue_v2","study":"Schmiedel_2018","biofeature_string":"Th17_memory","biofeature_code":"TH17_MEMORY","biofeature_ontology_term":"CL_0000899","label":"Th17 cell","tissue_label":"Th17 cell","condition_label":"naive"} {"original_source":"eqtl_catalogue_v2","study":"Schmiedel_2018","biofeature_string":"Th1_memory","biofeature_code":"TH1_MEMORY","biofeature_ontology_term":"CL_0000545","label":"Th1 cell","tissue_label":"Th1 cell","condition_label":"naive"} @@ -73,14 +92,14 @@ {"original_source":"eqtl_catalogue_v2","study":"Schmiedel_2018","biofeature_string":"CD4_T-cell_anti-CD3-CD28","biofeature_code":"CD4_T-CELL_ANTI-CD3-CD28","biofeature_ontology_term":"CL_0000624","label":"CD4+ T cell anti-CD3-CD28 4h","tissue_label":"CD4+ T cell","condition_label":"anti-CD3-CD28_4h"} {"original_source":"eqtl_catalogue_v2","study":"Schmiedel_2018","biofeature_string":"CD8_T-cell_naive","biofeature_code":"CD8_T-CELL_NAIVE","biofeature_ontology_term":"CL_0000625","label":"CD8+ T cell","tissue_label":"CD8+ T cell","condition_label":"naive"} {"original_source":"eqtl_catalogue_v2","study":"Schmiedel_2018","biofeature_string":"CD8_T-cell_anti-CD3-CD28","biofeature_code":"CD8_T-CELL_ANTI-CD3-CD28","biofeature_ontology_term":"CL_0000625","label":"CD8+ T cell anti-CD3-CD28 4h","tissue_label":"CD8+ T cell","condition_label":"anti-CD3-CD28_4h"} -{"original_source":"eqtl_catalogue_v2","study":"Schmiedel_2018","biofeature_string":"monocyte_CD16_naive","biofeature_code":"MONOCYTE_CD16_NAIVE","biofeature_ontology_term":"CL_0002396","label":"CD16+ monocyte","tissue_label":"CD16+ monocyte","condition_label":"naive"} 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