portal.properties.patch

--- portal.properties.EXAMPLE
+++ portal.properties
@@ -3,27 +3,27 @@
 app.version=${timestamp}
 
 # database
-db.user=cbio_user
-db.password=somepassword
-db.host=localhost
+db.user=cbio
+db.password=P@ssword1
+db.host=cbioDB
 db.portal_db_name=cbioportal
 db.driver=com.mysql.jdbc.Driver
-db.connection_string=jdbc:mysql://localhost/
+db.connection_string=jdbc:mysql://cbioDB/
 db.tomcat_resource_name=jdbc/cbioportal
 # this is the *expected* DB version (expected by the code). Don't set it manually, it is filled by maven:
 db.version=${db.version}
 
 # web page cosmetics
-skin.title=cBioPortal for Cancer Genomics
+skin.title=Local cBioPortal instance
 skin.email_contact=cbioportal at googlegroups dot com
-skin.authorization_message=Access to this portal is only available to authorized users at Memorial Sloan Kettering Cancer Center.  [<a href="http://bit.ly/ZevaHa">Request Access</a>].
+skin.authorization_message=Access to this portal is only available to authorized users.
 skin.example_study_queries=tcga\ntcga -provisional\ntcga -moratorium\ntcga OR icgc\n-"cell line"\nprostate mskcc\nesophageal OR stomach\nserous\nbreast
 skin.data_sets_header=The portal currently contains data from the following cancer genomics studies.  The table below lists the number of available samples per data type and tumor.
-skin.data_sets_footer=Data sets of TCGA studies were downloaded from Broad Firehose (http://gdac.broadinstitute.org) and updated monthly. In some studies, data sets were from the TCGA working groups directly.
+skin.data_sets_footer=
 skin.examples_right_column=examples.html
 
 # documentation pages
-skin.documentation.baseurl=https://github.com/cBioPortal/cbioportal/wiki/
+skin.documentation.baseurl=https://raw.githubusercontent.com/cBioPortal/cbioportal/master/docs/
 skin.documentation.markdown=true
 skin.documentation.faq=FAQ.md
 skin.documentation.about=About-Us.md
@@ -54,10 +54,10 @@
 skin.footer= | <a href="http://www.mskcc.org/mskcc/html/44.cfm">MSKCC</a> | <a href="http://cancergenome.nih.gov/">TCGA</a>
 
 # setting controlling html for the contact
-skin.login.contact_html=If you think you have received this message in error, please contact us at <a style="color:#FF0000" href="mailto:cbioportal-access@cbio.mskcc.org">cbioportal-access@cbio.mskcc.org</a>
+skin.login.contact_html=If you think you have received this message in error, please contact us
 
 # setting controlling the saml registration
-skin.login.saml.registration_html=Sign in with MSK
+skin.login.saml.registration_html=Sign in
 
 # setting controlling which tabs to hide/show in the patient view
 skin.patient_view.show_clinical_trials_tab=false
@@ -114,11 +114,11 @@
 patient_view_genomic_overview_cna_cutoff=0.2,1.5
 digitalslidearchive.iframe.url=http://cancer.digitalslidearchive.net/index_mskcc.php?slide_name=
 digitalslidearchive.meta.url=http://cancer.digitalslidearchive.net/local_php/get_slide_list_from_db_groupid_not_needed.php?slide_name_filter=
-tumor_image.url=http://cbio.mskcc.org/cancergenomics/tcga-tumor-images/
+tumor_image.url=
 tcga_path_report.url=https://github.com/cbioportal/datahub/raw/master/tcga/pathology_reports/pathology_reports.txt
 
 # various url's
-segfile.url=http://cbio.mskcc.org/cancergenomics/gdac-portal/seg/
+segfile.url=
 
 # Enable OncoKB annotation
 oncokb.url=http://oncokb.org/legacy-api/
@@ -144,7 +144,7 @@
 pathway_commons.url=http://www.pathwaycommons.org/pc2
 
 # bitly, please use your bitly user and apiKey
-bitly.url=http://api.bit.ly/shorten?login=[bitly.user]&apiKey=[bitly.apiKey]&
+bitly.url=
 
 # pdb url
 pdb.database.url=http://rcsb.org/pdb/files/