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181 repositories
scimaps
Public- Supporting information page for the "Function Tissue Units in the Human Reference Atlas" paper
hra-organ-gallery-in-vr
Publichra-queries
Public- Supporting information page for the HRApop paper
macroscope-kiosk
Public- Supporting information for page for the "Enriching and Using 3D Reference Objects in the Human Reference Atlas in the HRA user Interfaces and the HRA Organ Gallery in Virtual Reality" paper
hra-node-dist-vis
PublicHRA Node Distance Visualization Web Componenthra-scrollytelling
PublicLearn about the HRA through scrollytelling!a2agc-dataset
Public- Supporting information page for the FTU Explorer paper (in progress)
hra-lymphatics-3d-do
Publichra-glb-preprocessor
Publichra-scrolly-3d-assets
Public- Code for "Vasculature segmentation in 3D hierarchical phase-contrast tomography images of human kidneys"
hra-amap
PublicHRA-AMAP: Bidirectional Projections Between Human Atlas Systems for Data and Code Interoperability- API to generate 3D Cells inside Anatomical Structures
hra-juelich
Publichra-ct-heterogeneity
Public- Supporting information page for the "Human BioMolecular Atlas Program (HuBMAP): 3D Reference Atlas Construction and Usage" paper
- GPU-powered API to generate corridors (GLB) for RUI locations
hra-cell-embeddings
Publichra-pop-helios
Publichra-mouse-registrations
PublicBlender files and models for 5x5 mouse registrations- HRA VCCF cell distance visualizations extended to other organs, based on work on skin data.
hra-4dn-3d-prototyping
Publichra-name-disambiguation
Publichra-glb-download
PublicDownload HRA 3D Reference Organ GLB files