Repositories list

• rdmkit

  Public
  ELIXIR Data Management Toolkit - Find the answers to your research data management questions here.

  researchdata-management

  Python

  •

  Other

  •134•84•31•8•Updated Dec 23, 2024Dec 23, 2024

• MARS

  Public
  Multi-Repository Data Submission using ISA-JSON

  Java

  •

  MIT License

  •8•6•24•2•Updated Dec 23, 2024Dec 23, 2024

• faircookbook-rdmkit

  Public
  This repository will in the first place be used to link pages between FAIR Cookbook and RDMkit.

  Python

  •

  MIT License

  •4•6•19•2•Updated Dec 23, 2024Dec 23, 2024

• infectious-diseases-toolkit

  Public
  Infectious diseases toolkit

  Python

  •

  Other

  •40•9•9•4•Updated Dec 23, 2024Dec 23, 2024

• plant-brapi-etl-faidare

  Public
  Harvest and index meta data from BrAPI endpoints for data access through the plant-faidare data lookup portal (https://github.com/elixir-europe/plant-faidare).

  brapielixir-plantbreeding-api+ 1etl

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •8•7•12•10•Updated Dec 18, 2024Dec 18, 2024

• dsw-tips-and-tricks

  Public
  Tips and tricks on Data Stewardship Wizard (DSW) for data stewards.

  Jinja

  •

  MIT License

  •0•1•3•0•Updated Dec 10, 2024Dec 10, 2024

• sco-community

  Public
  A public repository to host the Single Cell Omics community webpage: https://www.singlecellomics.org

  Shell

  •

  MIT License

  •6•2•33•0•Updated Nov 28, 2024Nov 28, 2024

• beacon-network

  Public
  ELIXIR Beacon Network Repository

  HTML

  •1•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• compute_wp5

  Public
  Compute Platform 2024-2026 Work Package 5

  0•1•8•0•Updated Nov 13, 2024Nov 13, 2024

• by-covid-website

  Public
  The code for the BY-COVID project website.

  react-bootstrapbootstrap5react+ 2reactjsgatsby

  MDX

  •

  BSD Zero Clause License

  •4•2•1•0•Updated Nov 12, 2024Nov 12, 2024

• biovalidator

  Public
  JSON validator derived from AJV supporting ontology and taxonomy validation.

  JavaScript

  •

  Apache License 2.0

  •6•20•16•2•Updated Nov 11, 2024Nov 11, 2024

• biohackathon-projects-2024

  Public
  Project code for BioHackathon Europe 2024.

  biohackeu24

  15•17•0•0•Updated Nov 11, 2024Nov 11, 2024

• biohackathon-europe-2024

  Public
  For the BioHackathon Europe 2024 website.

  HTML

  •3•4•0•0•Updated Nov 6, 2024Nov 6, 2024

• java-json-schema-validator

  Public
  Java

  •

  GNU Lesser General Public License v2.1

  •0•0•0•0•Updated Oct 23, 2024Oct 23, 2024

• neat-beacon-v2-validator

  Public
  Simple java-based Beacon v2 validator

  Java

  •

  GNU Lesser General Public License v2.1

  •0•0•0•0•Updated Oct 18, 2024Oct 18, 2024

• intoxicom-workshop-report-template

  Public template
  INTOXICOM Workshop Report Template

  TeX

  •

  Creative Commons Zero v1.0 Universal

  •1•0•0•0•Updated Oct 17, 2024Oct 17, 2024

• beacon-network-backend

  Public
  Java Beacon Network server

  Java

  •

  GNU Lesser General Public License v2.1

  •1•1•0•0•Updated Oct 9, 2024Oct 9, 2024

• beacon-network-ui

  Public
  JavaScript

  •

  Apache License 2.0

  •1•1•10•0•Updated Oct 2, 2024Oct 2, 2024

• elixir-smp-lesson

  Public
  ELIXIR SMP lessons

  managementsoftwaresmp+ 4lessonplantutorialelixir

  TeX

  •

  Other

  •0•0•0•1•Updated Oct 1, 2024Oct 1, 2024

• plant-faidare

  Public
  FAIDARE (FAIR Data-finder for Agronomic REsearch) is a plant scientific data portal. This is a mirror of the main repository (https://forgemia.inra.fr/urgi-is/faidare) that embed the continuous integration environment. Issues should preferably be created in Gitlab. It relies on https://github.com/elixir-europe/plant-brapi-etl-faidare for harvest…

  Java

  •

  BSD 3-Clause "New" or "Revised" License

  •0•4•0•23•Updated Sep 4, 2024Sep 4, 2024

• biohackathon-projects-2023

  Public
  Project code for BioHackathon Europe 2023.

  biohackeu23

  Java

  •26•17•0•0•Updated Aug 20, 2024Aug 20, 2024

• BY-COVID_WP2_T2.4_Socioeconomics_Metadata_Harvester

  Public
  Java

  •

  Other

  •0•0•0•0•Updated Aug 20, 2024Aug 20, 2024

• BY-COVID_WP5_T5.2_baseline-use-case

  Public
  0•0•0•0•Updated Aug 9, 2024Aug 9, 2024

• java-beacon-v2.api

  Public
  Beacon v2 java model

  Java

  •

  GNU Lesser General Public License v2.1

  •0•0•0•0•Updated Jul 22, 2024Jul 22, 2024

• beacon-network-docker

  Public
  Beacon Network v2 docker installation

  Shell

  •1•1•0•0•Updated Jun 18, 2024Jun 18, 2024

• crypt4gh-recryptor-service

  Public
  Python

  •

  Apache License 2.0

  •0•0•1•0•Updated May 11, 2024May 11, 2024

• biohackathon-europe-2023

  Public
  For the BioHackathon Europe 2023 website.

  SCSS

  •

  MIT License

  •5•3•0•0•Updated Feb 23, 2024Feb 23, 2024

• biohackathon-projects-2022

  Public
  Project code for BioHackathon Europe 2022.

  biohackeu22

  HTML

  •26•20•0•1•Updated Jan 10, 2024Jan 10, 2024

• java-ga4gh-vrs-model

  Public
  GA4GH Variation Representation Specification Java Model

  Java

  •

  GNU Lesser General Public License v2.1

  •0•0•0•0•Updated Oct 16, 2023Oct 16, 2023

• java-service-info-data-model

  Public
  Java model for GA4GH service-info

  Java

  •

  GNU Lesser General Public License v2.1

  •0•0•0•0•Updated Oct 16, 2023Oct 16, 2023