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    71 repositories

    • distributions

      Public
      Dockerfile
      •
      BSD 3-Clause "New" or "Revised" License
      •5•1•2•4•Updated Oct 3, 2024Oct 3, 2024

    • action-library-packaging

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5•0•0•0•Updated Oct 3, 2024Oct 3, 2024

    • q2-vizard

      Public
      The first choice of wizard lizards for interactive, generalized microbiome data visualization!
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •9•0•9•4•Updated Oct 2, 2024Oct 2, 2024

    • q2view

      Public
      A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations
      TypeScript
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Sep 30, 2024Sep 30, 2024

    • data302

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •10•0•1•0•Updated Sep 27, 2024Sep 27, 2024

    • qiime2.org

      Public
      qiime2.org source
      JavaScript
      •2•0•0•0•Updated Sep 27, 2024Sep 27, 2024

    • q2-fmt

      Public
      q2-fmt is an all-in-one suite for assessing engraftment extent following Fecal Microbiota Transplants!
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •10•4•11•1•Updated Sep 26, 2024Sep 26, 2024

    • resources

      Public
      Source for QIIME 2 Resources page.
      TeX
      •
      BSD 3-Clause "New" or "Revised" License
      •4•1•1•0•Updated Sep 26, 2024Sep 26, 2024

    • q2-emperor

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •22•1•4•0•Updated Sep 26, 2024Sep 26, 2024

    • q2-alignment

      Public
      Support for multiple sequence alignment in QIIME 2.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •21•2•7•0•Updated Sep 26, 2024Sep 26, 2024

    • qiime2

      Public
      Official repository for the QIIME 2 framework.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •237•469•67•8•Updated Sep 19, 2024Sep 19, 2024

    • q2-types

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •41•15•25•0•Updated Sep 19, 2024Sep 19, 2024

    • q2-vsearch

      Public
      vsearch plugin for QIIME 2
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •20•6•10•2•Updated Sep 18, 2024Sep 18, 2024

    • q2-fragment-insertion

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •17•13•10•0•Updated Sep 18, 2024Sep 18, 2024

    • q2-demux

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •20•0•11•0•Updated Sep 12, 2024Sep 12, 2024

    • q2-longitudinal

      Public
      QIIME 2 plugin for paired sample comparisons
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •18•9•30•1•Updated Sep 4, 2024Sep 4, 2024

    • q2lint

      Public
      Linter for official QIIME 2 software.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •11•0•1•0•Updated Sep 3, 2024Sep 3, 2024

    • q2cli

      Public
      Command line interface for QIIME 2
      hacktoberfestq2interface
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •24•19•13•1•Updated Aug 27, 2024Aug 27, 2024

    • q2-feature-table

      Public
      QIIME 2 plugin supporting operations on feature tables.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •37•2•23•2•Updated Aug 21, 2024Aug 21, 2024

    • q2-dada2

      Public
      QIIME 2 plugin wrapping DADA2
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •36•20•11•1•Updated Aug 21, 2024Aug 21, 2024

    • q2-diversity

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •45•4•46•0•Updated Aug 12, 2024Aug 12, 2024

    • q2-feature-classifier

      Public
      QIIME 2 plugin supporting taxonomic classification
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •38•18•7•0•Updated Jul 31, 2024Jul 31, 2024

    • docs

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •58•21•34•0•Updated Jul 29, 2024Jul 29, 2024

    • q2view-gallery

      Public
      HTML
      •
      BSD 3-Clause "New" or "Revised" License
      •3•0•0•0•Updated Jul 22, 2024Jul 22, 2024

    • cancer-microbiome-intervention-tutorial

      Public
      JupyterBook for QIIME 2 FAES January 2022 workshop
      hacktoberfest
      Jupyter Notebook
      •
      Other
      •15•11•1•0•Updated Jul 10, 2024Jul 10, 2024

    • q2-diversity-lib

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •11•0•6•0•Updated Jul 3, 2024Jul 3, 2024

    • sphinx-ext-qiime2

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5•2•2•0•Updated Jun 24, 2024Jun 24, 2024

    • q2galaxy

      Public
      Generate Galaxy tool descriptions automatically from QIIME 2 actions.
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •18•19•8•0•Updated Jun 13, 2024Jun 13, 2024

    • q2-stats

      Public
      hacktoberfest
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •7•1•2•1•Updated Jun 5, 2024Jun 5, 2024

    • vm-playbooks

      Public
      Ansible playbooks for QIIME 2 environments
      hacktoberfest
      Shell
      •
      BSD 3-Clause "New" or "Revised" License
      •12•7•1•0•Updated Jun 5, 2024Jun 5, 2024