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    16 repositories

    • turing-roche-documentation

      Public
      Other
      •3•28•1•0•Updated Oct 10, 2024Oct 10, 2024

    • .github

      Public
      Other
      •0•0•0•0•Updated Aug 28, 2024Aug 28, 2024

    • EnMAS

      Public
      The code encodes mutation rates of amino acids for sequence-based PPI prediction, that is important to track protein function evolution and personalised drug matching.
      Python
      •0•0•0•0•Updated Jul 4, 2024Jul 4, 2024

    • In-Silico-Drug-Repurposing-Methodology-To-Suggest-Therapies-For-Emerging-Threats-like-Mpox

      Public
      Repository for Theme Lead Rohan Chakraborty paper- https://www.nature.com/articles/s41598-024-69617-8
      Jupyter Notebook
      •1•0•0•0•Updated Jun 26, 2024Jun 26, 2024

    • TSciM-Club_May2024

      Public template
      From May's TSciM Event: Application of interpretability methods to ML models for age prediction from neuroimaging data
      Jupyter Notebook
      •3•0•0•0•Updated May 23, 2024May 23, 2024

    • copula_sm

      Public
      Code to generate Structured Missingness using a Copula
      R
      •
      Other
      •0•0•0•0•Updated May 17, 2024May 17, 2024

    • reproducible-project-template

      Public template
      Template repository for setting a reproducible research project.
      Other
      •1•0•0•0•Updated Apr 25, 2024Apr 25, 2024

    • Ricci-NN

      Public
      Repository for this paper- https://arxiv.org/abs/2404.14265
      Python
      •1•0•0•0•Updated Apr 25, 2024Apr 25, 2024

    • triaction

      Public
      triaction package for triadic interactions
      Jupyter Notebook
      •2•0•0•0•Updated Apr 25, 2024Apr 25, 2024

    • Computational-Drug-Repurposing-for-Viral-Infectious-Diseases-A-Case-Study-on-Monkeypox

      Public
      In-silico computational drug repurposing approach using PPINs and host-pathogen interactions with MPOx as case study, but generalisable to any similar tasks
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Apr 23, 2024Apr 23, 2024

    • MSO-GP

      Public
      An unsupervised and transparent 3-D segmentation algorithm using digital topology/morphometry for large and complex conjoined tree structures, like artery-vein angiogram
      1•0•0•0•Updated Apr 6, 2024Apr 6, 2024

    • Geometry-Informed-Data-Representations

      Public
      Turing Challenge 2024
      Jupyter Notebook
      •1•0•0•0•Updated Feb 4, 2024Feb 4, 2024

    • Cellular-differentiation-trajectories-with-Ricci-flow

      Public
      Charting cellular differentiation trajectories with normalised discrete Ricci flow
      R
      •
      MIT License
      •1•0•0•0•Updated Jan 8, 2024Jan 8, 2024

    • RUBic

      Public
      RUBic: Rapid Unsupervised Biclustering (currently being used on the Roche CGDB dataset)
      Jupyter Notebook
      •2•0•0•0•Updated Nov 17, 2023Nov 17, 2023

    • pynetflow

      Public
      Ricci curvature and Ricci flow on networks
      Python
      •1•0•0•0•Updated Aug 4, 2023Aug 4, 2023

    • DeepFuzz

      Public
      An image segmentation pipeline that combines a data driven deep learning model (U-Net) with a transparent mechanistic model (fuzzy water follow) as an example of transparent hybrid AI
      1•0•0•0•Updated May 17, 2023May 17, 2023