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Minimum peptide length #36

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lindaz711 opened this issue Apr 13, 2020 · 1 comment
Open

Minimum peptide length #36

lindaz711 opened this issue Apr 13, 2020 · 1 comment

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@lindaz711
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Is there a way to specify the minimum or maximum peptide length for a search? I noticed that the default value for minimum peptide length is 6 from the output .pglyco file but couldn't find a way to modify that value.
Thank you.
@jalew188
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@lindaz711 The only way to change it is: save the parameter file in GUI, modified the parameter file using a text editor, and run pGlyco with the command line (cd to bin path of pGlyco installation folder, and run pGlycoDB.exe path\of\your\parameter\file)

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@jalew188 @lindaz711