diff --git a/vignettes/a-getting-started.Rmd b/vignettes/a-getting-started.Rmd index ed389ad6..a93bf8a9 100644 --- a/vignettes/a-getting-started.Rmd +++ b/vignettes/a-getting-started.Rmd @@ -9,7 +9,7 @@ vignette: > **Authors:** Lewis A. Jones & William Gearty -**Last updated:** 2023-12-20 +**Last updated:** 2024-01-23 @@ -53,8 +53,8 @@ citation("rphylopic") ``` ## To cite rphylopic in publications, use the following citation: ## -## Gearty, W. and Jones, L.A. 2023. rphylopic: An R package for fetching, transforming, and visualising -## PhyloPic silhouettes. Methods in Ecology and Evolution, 14(11), 2700-2708. doi: 10.1111/2041-210X.14221. +## Gearty, W. and Jones, L.A. 2023. rphylopic: An R package for fetching, transforming, and visualising PhyloPic +## silhouettes. Methods in Ecology and Evolution, 14(11), 2700-2708. doi: 10.1111/2041-210X.14221. ## ## A BibTeX entry for LaTeX users is ## @@ -212,25 +212,30 @@ get_attribution(uuid = uuid) ``` ``` -## $contributor +## $images +## $images$`7f877a9e-53d7-48d0-a422-d3fa0ff5e2f9` +## $images$`7f877a9e-53d7-48d0-a422-d3fa0ff5e2f9`$attribution +## [1] "Mareike C. Janiak" +## +## $images$`7f877a9e-53d7-48d0-a422-d3fa0ff5e2f9`$contributor ## [1] "Mareike Janiak" ## -## $contributor_uuid +## $images$`7f877a9e-53d7-48d0-a422-d3fa0ff5e2f9`$contributor_uuid ## [1] "7bed68fb-cf59-4e58-aed1-41e81269fb01" ## -## $created +## $images$`7f877a9e-53d7-48d0-a422-d3fa0ff5e2f9`$created ## [1] "2020-05-19" ## -## $contact +## $images$`7f877a9e-53d7-48d0-a422-d3fa0ff5e2f9`$contact ## character(0) ## -## $image_uuid +## $images$`7f877a9e-53d7-48d0-a422-d3fa0ff5e2f9`$image_uuid ## [1] "7f877a9e-53d7-48d0-a422-d3fa0ff5e2f9" ## -## $license +## $images$`7f877a9e-53d7-48d0-a422-d3fa0ff5e2f9`$license ## [1] "https://creativecommons.org/publicdomain/mark/1.0/" ## -## $license_abbr +## $images$`7f877a9e-53d7-48d0-a422-d3fa0ff5e2f9`$license_abbr ## [1] "Public Domain Mark 1.0" ``` @@ -245,7 +250,7 @@ get_attribution(uuid = uuid, text = TRUE) ``` ``` -## Organism silhouettes are from PhyloPic (https://www.phylopic.org/; T. Michael Keesey, 2023) and were added using the rphylopic R package ver. 1.2.2.9000 (Gearty & Jones, 2023). Silhouette was contributed by Mareike Janiak, 2020 (Public Domain Mark 1.0). +## Organism silhouettes are from PhyloPic (https://www.phylopic.org/; T. Michael Keesey, 2023) and were added using the rphylopic R package ver. 1.3.0.9000 (Gearty & Jones, 2023). Silhouette was made by Mareike C. Janiak, 2020 (Public Domain Mark 1.0). Silhouette was contributed by Mareike Janiak. ``` ## Save an image diff --git a/vignettes/b-advanced-ggplot.Rmd b/vignettes/b-advanced-ggplot.Rmd index e04cb2c9..a03b30d9 100644 --- a/vignettes/b-advanced-ggplot.Rmd +++ b/vignettes/b-advanced-ggplot.Rmd @@ -9,7 +9,7 @@ vignette: > **Authors:** William Gearty & Lewis A. Jones -**Last updated:** 2023-11-16 +**Last updated:** 2024-01-23 diff --git a/vignettes/base-geog-plot-2-1.png b/vignettes/base-geog-plot-2-1.png index d40d6efd..266a8ddf 100644 Binary files a/vignettes/base-geog-plot-2-1.png and b/vignettes/base-geog-plot-2-1.png differ diff --git a/vignettes/base-penguin-plot-2-1.png b/vignettes/base-penguin-plot-2-1.png index 035f9756..3f0e0a89 100644 Binary files a/vignettes/base-penguin-plot-2-1.png and b/vignettes/base-penguin-plot-2-1.png differ diff --git a/vignettes/base-penguin-plot-3-1.png b/vignettes/base-penguin-plot-3-1.png index d18dd45a..72432a73 100644 Binary files a/vignettes/base-penguin-plot-3-1.png and b/vignettes/base-penguin-plot-3-1.png differ diff --git a/vignettes/base-penguin-plot-4-1.png b/vignettes/base-penguin-plot-4-1.png index 40ae53de..20484a83 100644 Binary files a/vignettes/base-penguin-plot-4-1.png and b/vignettes/base-penguin-plot-4-1.png differ diff --git a/vignettes/base-penguin-plot-5-1.png b/vignettes/base-penguin-plot-5-1.png index 05ee6310..1f4fcf9d 100644 Binary files a/vignettes/base-penguin-plot-5-1.png and b/vignettes/base-penguin-plot-5-1.png differ diff --git a/vignettes/base-phylo-plot-3-1.png b/vignettes/base-phylo-plot-3-1.png index a77a4a7e..0e0ffc85 100644 Binary files a/vignettes/base-phylo-plot-3-1.png and b/vignettes/base-phylo-plot-3-1.png differ diff --git a/vignettes/base-phylo-plot-4-1.png b/vignettes/base-phylo-plot-4-1.png index 16839111..475af7a3 100644 Binary files a/vignettes/base-phylo-plot-4-1.png and b/vignettes/base-phylo-plot-4-1.png differ diff --git a/vignettes/c-advanced-base.Rmd b/vignettes/c-advanced-base.Rmd index 4108bdb2..614ff713 100644 --- a/vignettes/c-advanced-base.Rmd +++ b/vignettes/c-advanced-base.Rmd @@ -9,7 +9,7 @@ vignette: > **Authors:** William Gearty & Lewis A. Jones -**Last updated:** 2023-11-16 +**Last updated:** 2024-01-23 diff --git a/vignettes/ggplot-geog-plot-2-1.png b/vignettes/ggplot-geog-plot-2-1.png index dc4a46f0..d499590e 100644 Binary files a/vignettes/ggplot-geog-plot-2-1.png and b/vignettes/ggplot-geog-plot-2-1.png differ diff --git a/vignettes/ggplot-geog-plot-3-1.png b/vignettes/ggplot-geog-plot-3-1.png index 48375a17..c70f3a5c 100644 Binary files a/vignettes/ggplot-geog-plot-3-1.png and b/vignettes/ggplot-geog-plot-3-1.png differ diff --git a/vignettes/ggplot-penguin-plot-2-1.png b/vignettes/ggplot-penguin-plot-2-1.png index 090d8991..aa41f20b 100644 Binary files a/vignettes/ggplot-penguin-plot-2-1.png and b/vignettes/ggplot-penguin-plot-2-1.png differ diff --git a/vignettes/ggplot-penguin-plot-3-1.png b/vignettes/ggplot-penguin-plot-3-1.png index 21e5aaa6..e5083ef4 100644 Binary files a/vignettes/ggplot-penguin-plot-3-1.png and b/vignettes/ggplot-penguin-plot-3-1.png differ diff --git a/vignettes/ggplot-penguin-plot-4-1.png b/vignettes/ggplot-penguin-plot-4-1.png index 4cd56bcb..9934f0f2 100644 Binary files a/vignettes/ggplot-penguin-plot-4-1.png and b/vignettes/ggplot-penguin-plot-4-1.png differ diff --git a/vignettes/ggplot-penguin-plot-5-1.png b/vignettes/ggplot-penguin-plot-5-1.png index c691998f..689ce7a1 100644 Binary files a/vignettes/ggplot-penguin-plot-5-1.png and b/vignettes/ggplot-penguin-plot-5-1.png differ diff --git a/vignettes/ggplot-penguin-plot-6-1.png b/vignettes/ggplot-penguin-plot-6-1.png index ea298c5d..f845fb44 100644 Binary files a/vignettes/ggplot-penguin-plot-6-1.png and b/vignettes/ggplot-penguin-plot-6-1.png differ diff --git a/vignettes/ggplot-phylo-plot-3-1.png b/vignettes/ggplot-phylo-plot-3-1.png index 865490fa..93c08b89 100644 Binary files a/vignettes/ggplot-phylo-plot-3-1.png and b/vignettes/ggplot-phylo-plot-3-1.png differ diff --git a/vignettes/ggplot-phylo-plot-4-1.png b/vignettes/ggplot-phylo-plot-4-1.png index da76011a..2c7fc0ba 100644 Binary files a/vignettes/ggplot-phylo-plot-4-1.png and b/vignettes/ggplot-phylo-plot-4-1.png differ