From d16a615342941d0a6fc6691a812485031a2e7a0f Mon Sep 17 00:00:00 2001 From: Ray Stefancsik Date: Mon, 11 Nov 2024 12:00:25 +0000 Subject: [PATCH] Update imports Addresses https://github.com/obophenotype/xenopus-phenotype-ontology/issues/169#issuecomment-2466268746 . --- src/ontology/imports/merged_import.owl | 801 ++++++++++--------------- 1 file changed, 305 insertions(+), 496 deletions(-) diff --git a/src/ontology/imports/merged_import.owl b/src/ontology/imports/merged_import.owl index 680eb49..f83daf7 100644 --- a/src/ontology/imports/merged_import.owl +++ b/src/ontology/imports/merged_import.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-09-01") + +Annotation(owl:versionInfo "2024-11-11") Declaration(Class()) Declaration(Class()) @@ -42,7 +42,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -189,7 +188,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -278,7 +276,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -617,7 +614,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -648,6 +644,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -791,6 +788,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1097,7 +1095,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1240,7 +1237,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1314,7 +1310,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1500,7 +1495,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1868,11 +1862,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2521,16 +2513,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2958,7 +2946,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3019,14 +3006,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3420,8 +3405,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3548,6 +3531,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3882,8 +3866,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3914,7 +3896,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4176,6 +4157,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4250,6 +4232,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6151,6 +6134,7 @@ Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) @@ -6309,6 +6293,10 @@ SubAnnotationPropertyOf( ) +# Annotation Property: () + +SubAnnotationPropertyOf( ) + # Annotation Property: () SubAnnotationPropertyOf( ) @@ -8929,38 +8917,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (deoxyribonucleic acid) - -AnnotationAssertion( "High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms.") -AnnotationAssertion( "CHEBI:13302") -AnnotationAssertion( "CHEBI:21123") -AnnotationAssertion( "CHEBI:33698") -AnnotationAssertion( "CHEBI:4291") -AnnotationAssertion( "KEGG:C00039") -AnnotationAssertion(Annotation( "KEGG_COMPOUND") "Deoxyribonucleic acid") -AnnotationAssertion( "chebi_ontology") -AnnotationAssertion(Annotation( "KEGG_COMPOUND") "(Deoxyribonucleotide)m") -AnnotationAssertion(Annotation( "KEGG_COMPOUND") "(Deoxyribonucleotide)n") -AnnotationAssertion(Annotation( "KEGG_COMPOUND") "(Deoxyribonucleotide)n+m") -AnnotationAssertion(Annotation( "IUPAC") "DNA") -AnnotationAssertion(Annotation( "KEGG_COMPOUND") "DNA") -AnnotationAssertion(Annotation( "UniProt") "DNA") -AnnotationAssertion(Annotation( "KEGG_COMPOUND") "DNAn") -AnnotationAssertion(Annotation( "KEGG_COMPOUND") "DNAn+1") -AnnotationAssertion(Annotation( "ChEBI") "DNS") -AnnotationAssertion(Annotation( "ChEBI") "Desoxyribonukleinsaeure") -AnnotationAssertion(Annotation( "ChEBI") "deoxyribonucleic acids") -AnnotationAssertion(Annotation( "ChemIDplus") "desoxyribose nucleic acid") -AnnotationAssertion(Annotation( "ChEBI") "thymus nucleic acid") -AnnotationAssertion( "CHEBI:16991") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "deoxyribonucleic acid") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (ketone) AnnotationAssertion( "A compound in which a carbonyl group is bonded to two carbon atoms: R2C=O (neither R may be H).") @@ -11009,20 +10965,6 @@ AnnotationAssertion( "canonical ribonucleoside residue") SubClassOf( ) -# Class: (canonical deoxyribonucleoside residue) - -AnnotationAssertion( "chebi_ontology") -AnnotationAssertion(Annotation( "ChEBI") "canonical deoxyribonucleoside residues") -AnnotationAssertion(Annotation( "CBN") "common 2'-deoxyribonucleoside residue") -AnnotationAssertion(Annotation( "CBN") "common 2'-deoxyribonucleoside residues") -AnnotationAssertion(Annotation( "CBN") "dN") -AnnotationAssertion(Annotation( "CBN") "dNuc") -AnnotationAssertion(Annotation( "ChEBI") "standard deoxyribonucleoside residues") -AnnotationAssertion( "CHEBI:33793") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "canonical deoxyribonucleoside residue") -SubClassOf( ) - # Class: (organic hydroxy compound) AnnotationAssertion( "An organic compound having at least one hydroxy group attached to a carbon atom.") @@ -12140,15 +12082,6 @@ AnnotationAssertion( "canonical nucleotide residue") SubClassOf( ) -# Class: (canonical deoxyribonucleotide residue) - -AnnotationAssertion( "chebi_ontology") -AnnotationAssertion(Annotation( "ChEBI") "canonical deoxyribonucleotide residues") -AnnotationAssertion( "CHEBI:50298") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "canonical deoxyribonucleotide residue") -SubClassOf( ) - # Class: (canonical ribonucleotide residue) AnnotationAssertion( "chebi_ontology") @@ -13341,7 +13274,7 @@ AnnotationAssertion( "The definition of cell is intended to represent all cells, and thus a cell is defined as a material entity and not an anatomical structure, which implies that it is part of an organism (or the entirety of one).") AnnotationAssertion(rdfs:label "cell") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) @@ -13401,6 +13334,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "female germ cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -13425,9 +13359,8 @@ AnnotationAssertion( "oocyte") SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (oogonial cell) @@ -13481,6 +13414,7 @@ AnnotationAssertion( "glioblast") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuroblast (sensu Vertebrata)) @@ -13493,7 +13427,7 @@ AnnotationAssertion( "neuroblast (sensu Vertebrata)") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (stem cell) @@ -13507,6 +13441,7 @@ AnnotationAssertion( "This term applies to metazoan. For plant stem cells, consider using PO:0004011 ‘initial cell’ or its parent PO:0004010 ‘meristematic cell’.") AnnotationAssertion(rdfs:label "stem cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -13720,7 +13655,8 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ciliated cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial cell) @@ -13736,7 +13672,7 @@ AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "epithelial cell") -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -13768,7 +13704,6 @@ AnnotationAssertion(rdfs:label "bloo EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (columnar/cuboidal epithelial cell) @@ -13780,29 +13715,34 @@ SubClassOf( (squamous epithelial cell) +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any epithelial cell that is part of some squamous epithelium.") AnnotationAssertion( "CALOHA:TS-1249") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "squamous epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesothelial cell) -AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0721662544") "A flattened epithelial cell of mesenchymal origin that lines the serous cavity.") +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0721662544") Annotation( "PMID:26106328") "A flat, squamous-like epithelial cell of mesodermal origin. It forms the mesothelium, which lines the body's serous cavities including the pleural, peritoneal, and pericardial spaces. This cell plays a crucial role in synthesizing and secreting lubricants, such as glycosaminoglycans and surfactants, which minimize friction between adjacent tissues during movement.") AnnotationAssertion( "FMA:66773") AnnotationAssertion( "mesotheliocyte") AnnotationAssertion( ) AnnotationAssertion( ) +AnnotationAssertion(Annotation( "PMID:26106328") rdfs:comment "Mesothelial cells, which morphologically resemble squamous epithelial cells, express both epithelial markers (cytokeratins) and mesenchymal markers (vimentin), reflecting their mesodermal origin. They feature surface microvilli and apical-basal polarity. Under certain conditions, they can undergo mesothelial-to-mesenchymal transition. These cells also produce extracellular matrix proteins, maintain serosal homeostasis, and facilitate fluid transport.") AnnotationAssertion(rdfs:label "mesothelial cell") SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (circulating cell) AnnotationAssertion(Annotation( "GOC:add") "A cell which moves among different tissues of the body, via blood, lymph, or other medium.") AnnotationAssertion(rdfs:label "circulating cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood cell) @@ -13939,6 +13879,7 @@ AnnotationAssertion(rdfs:comment "Fr AnnotationAssertion(rdfs:label "endothelial cell") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CNS neuron (sensu Vertebrata)) @@ -13966,8 +13907,7 @@ SubClassOf( ObjectSomeValuesFrom( ) AnnotationAssertion(rdfs:label "neuron associated cell (sensu Vertebrata)") SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glial cell) @@ -13976,6 +13916,7 @@ AnnotationAssertion(Annotation( "BTO:0002606") AnnotationAssertion( "CALOHA:TS-0415") AnnotationAssertion( "FMA:54536") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000125") AnnotationAssertion( "neuroglial cell") AnnotationAssertion( "neuroglia") AnnotationAssertion( ) @@ -14115,6 +14056,7 @@ AnnotationAssertion( "exocrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glycosaminoglycan secreting cell) @@ -14150,6 +14092,7 @@ AnnotationAssertion( "endocrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) @@ -14159,6 +14102,7 @@ AnnotationAssertion(Annotation( "BTO:0003865") AnnotationAssertion( "FMA:62930") AnnotationAssertion( "MESH:D019858") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000164") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "enteroendocrine cell") SubClassOf( ) @@ -14237,6 +14181,7 @@ AnnotationAssertion( "muscle cell") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -14252,7 +14197,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cell of skeletal muscle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle cell) @@ -14280,7 +14225,7 @@ AnnotationAssertion( "receptor cell") AnnotationAssertion(rdfs:label "sensory receptor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -14307,15 +14252,16 @@ SubClassOf( ObjectSomeValuesFrom( (photoreceptor cell) -AnnotationAssertion(Annotation( "MESH:D010786") "A cell specialized to detect and transduce light.") +AnnotationAssertion(Annotation( "MESH:D010786") "A cell specialized in detecting light stimuli that are involved in visual perception.") AnnotationAssertion( "BTO:0001060") AnnotationAssertion( "CALOHA:TS-0868") AnnotationAssertion( "FMA:86740") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "photoreceptor cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (electrically active cell) @@ -14379,6 +14325,7 @@ AnnotationAssertion(Annotation( "FMA:72549") AnnotationAssertion( "ectoderm cell") AnnotationAssertion(rdfs:label "ectodermal cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -14390,6 +14337,7 @@ AnnotationAssertion( "mesoderm cell") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesodermal cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -14399,6 +14347,7 @@ AnnotationAssertion(Annotation( "FMA:72555") AnnotationAssertion( "endoderm cell") AnnotationAssertion(rdfs:label "endodermal cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -14418,6 +14367,7 @@ DisjointClasses( "FB:ma") Annotation( "GOC:tfm") "A cell with a single nucleus.") AnnotationAssertion(rdfs:label "single nucleate cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -14431,14 +14381,12 @@ SubClassOf( ObjectSomeValuesFrom( (multinucleate cell) -AnnotationAssertion(Annotation( "FB:ma") "A cell with more than one nucleus.") -AnnotationAssertion( "AEO:0000203") -AnnotationAssertion( "WBbt:0008074") -AnnotationAssertion( "syncitium") -AnnotationAssertion( "syncytial cell") -AnnotationAssertion( "syncytium") +AnnotationAssertion(Annotation( "FB:ma") Annotation( "Wikipedia:Multinucleate") "A cell with more than one nucleus.") +AnnotationAssertion(Annotation( "Wikipedia:Multinucleate") "multinucleated cells") +AnnotationAssertion(Annotation( "Wikipedia:Multinucleate") "polynuclear cells") AnnotationAssertion(rdfs:label "multinucleate cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -14465,21 +14413,21 @@ SubClassOf( ObjectSomeValuesFrom( (eukaryotic cell) -AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that only exists in Eukaryota.") +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that in taxon some Eukaryota.") AnnotationAssertion( "MESH:D005057") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eukaryotic cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (Eumycetozoan cell) -AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that only exists in Eumycetozoa.") +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that in taxon some Eumycetozoa.") AnnotationAssertion(rdfs:label "Eumycetozoan cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (eye photoreceptor cell) @@ -14489,6 +14437,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eye photoreceptor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -14581,6 +14530,7 @@ AnnotationAssertion( "scleral cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -14592,6 +14542,7 @@ AnnotationAssertion( "choroidal cell of the eye") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -14602,12 +14553,12 @@ AnnotationAssertion(Annotation( ) AnnotationAssertion(rdfs:label "extraembryonic cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trophoblast cell) -AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D014327") Annotation( "PMID:37630754") Annotation(rdfs:comment "doi:10.1007/978-3-030-84725-8") "An extraembryonic cell that develops from a trophectodermal cell. This cell is found in the outer layer of the blastocyst and can invade other structures in the uterus once the blastocyst implants into the uterine wall. A trophoblast cell is involved in the implantation of the embryo into the uterine wall, placental formation, remodelling of maternal vasculature in the uterus, nutrient and gas exchange, hormone production, and immune modulation to support fetal development.") +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D014327") Annotation( "PMID:37630754") Annotation( "doi:10.1007/978-3-030-84725-8") "An extraembryonic cell that develops from a trophectodermal cell. This cell is found in the outer layer of the blastocyst and can invade other structures in the uterus once the blastocyst implants into the uterine wall. A trophoblast cell is involved in the implantation of the embryo into the uterine wall, placental formation, remodelling of maternal vasculature in the uterus, nutrient and gas exchange, hormone production, and immune modulation to support fetal development.") AnnotationAssertion( "FMA:83028") AnnotationAssertion(Annotation( "doi:10.1007/978-3-030-84725-8") "trophoblastic cell") AnnotationAssertion(rdfs:label "trophoblast cell") @@ -14676,11 +14627,11 @@ AnnotationAssertion( "EHDAA2:0004546") AnnotationAssertion( "FMA:72395") AnnotationAssertion(rdfs:label "animal zygote") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (electrically responsive cell) @@ -14829,11 +14780,11 @@ SubClassOf( ObjectSomeValuesFrom( (fungal cell) -AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that only exists in Fungi.") +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that in taxon some Fungi.") AnnotationAssertion(rdfs:label "fungal cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (syncytiotrophoblast cell) @@ -14847,8 +14798,8 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "syncytiotrophoblast cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (afferent neuron) @@ -14918,6 +14869,7 @@ AnnotationAssertion(rdfs:label "proe EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -14946,6 +14898,7 @@ AnnotationAssertion(Annotation( "basophilic erythroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -14963,6 +14916,7 @@ AnnotationAssertion(Annotation( "polychromatophilic erythroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -15054,6 +15008,7 @@ AnnotationAssertion( "reticulocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -15090,6 +15045,7 @@ AnnotationAssertion(rdfs:label "angi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -15206,6 +15162,7 @@ SubClassOf( (fenestrated endothelial cell) AnnotationAssertion(Annotation( "DOI:10.1007/978-3-211-99390-3_133") "An endothelial cell that has small pores, or fenestrations, which allow for the efficient exchange of substances between the blood and surrounding tissues.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000666") AnnotationAssertion( "window cell") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fenestrated endothelial cell") @@ -15248,6 +15205,7 @@ AnnotationAssertion(rdfs:label "musc EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -15279,6 +15237,7 @@ SubClassOf( ObjectSomeValuesFrom( "GOC:tfm") Annotation( "JB:jb") Annotation( "PMID:15153415") "A cell that stores and secretes pancreatic polypeptide hormone.") AnnotationAssertion( "FMA:62938") AnnotationAssertion( "FMA:83409") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000696") AnnotationAssertion( "type F enteroendocrine cell") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "PP cell") @@ -15342,7 +15301,7 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -15396,6 +15355,7 @@ AnnotationAssertion( "myeloid cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -15465,7 +15425,9 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "hematopoietic multipotent progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -15568,7 +15530,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (hematopoietic oligopotent progenitor cell, lineage-negative) @@ -15646,6 +15608,7 @@ AnnotationAssertion( "erythroid progenitor cell, mammalian") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -15669,6 +15632,7 @@ AnnotationAssertion( "hematopoietic lineage restricted progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -15684,6 +15648,7 @@ AnnotationAssertion(rdfs:comment "Th AnnotationAssertion(rdfs:label "hematopoietic oligopotent progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -15694,6 +15659,7 @@ AnnotationAssertion(Annotation( ) AnnotationAssertion( "2010-09-10T10:48:54Z"^^xsd:dateTime) AnnotationAssertion( "FMA:62939") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002067") AnnotationAssertion(rdfs:label "type A enteroendocrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -16039,7 +16005,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (connective tissue cell) @@ -16053,7 +16019,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "connective tissue cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic cell (metazoa)) @@ -16132,28 +16098,30 @@ SubClassOf( ObjectSomeValuesFrom( (myotube) -AnnotationAssertion(Annotation( "GOC:dos") Annotation( "GOC:tfm") Annotation( "ISBN:0323052908") Annotation( "PMID:22274696") "A transversely striated, synctial muscle cell, formed by the fusion of myoblasts.") +AnnotationAssertion(Annotation( "GOC:dos") Annotation( "GOC:tfm") Annotation( "ISBN:0323052908") Annotation( "PMID:22274696") "A transversely striated, multinucleated syncytial muscle cell, formed by the fusion of myoblasts during muscle development.") AnnotationAssertion( ) AnnotationAssertion( "2010-09-24T01:13:01Z"^^xsd:dateTime) -AnnotationAssertion( "myotubule") -AnnotationAssertion( "single cell sarcomere") +AnnotationAssertion(Annotation( "FBbt:00005812") "myofiber") +AnnotationAssertion(Annotation( "FBbt:00005812") "myofibril") AnnotationAssertion(rdfs:label "myotube") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Schwann cell precursor) -AnnotationAssertion(Annotation( "GOC:tfm") "A glioblast cell that develops from a migratory neural crest cell. The SCP is embedded among neurons (axons) with minimal extracellular spaces separating them from nerve cell membranes and has no basal lamina. In rodents SCPs are the only cells in the Schwann cell linage that expresses Cdh19.") +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:15580626") Annotation( "PMID:30971890") Annotation( "PMID:35815410") "A multipotent progenitor cell that develops from a migratory neural crest cell. The schwann cell precursor is embedded among axons, with minimal extracellular space separating them from nerve cell membranes. This cell lacks a basal lamina, which distinguishes it from more mature Schwann cells. In rodents, cadherin-19 (Cdh19) serves as a specific marker for this developmental stage.") AnnotationAssertion( ) AnnotationAssertion( "2010-09-24T02:06:10Z"^^xsd:dateTime) AnnotationAssertion( "Schwann cell precursor cell") AnnotationAssertion( ) +AnnotationAssertion(Annotation( "PMID:35815410") rdfs:comment "Schwann cell precursor are capable of differentiating into Schwann cells and other cell types such as melanocytes, neurons, and mesenchymal cells.") AnnotationAssertion(rdfs:label "Schwann cell precursor") -SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (immature Schwann cell) @@ -16200,7 +16168,6 @@ AnnotationAssertion(Annotation( "MESH:D000073637") AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion(Annotation( "ISBN:9780702028991") Annotation( "PMID:10704434") Annotation( "PMID:2182078") rdfs:comment "This cell type can be purified from optic nerves and other regions of the embryonic, postnatal and adult rat CNS and can be differentiated in vitro to oligodendrocytes and type-2 astrocytes. Some references use the terms 'oligodendrocyte precursor cell' and 'oligodendrocyte type-2 astrocyte (O-2A) progenitor' to refer to the same entity (e.g., PMID:10704434), while others describe an oligodendrocyte type-2 astrocyte (O-2A) progenitor cell as the precurosr to oligodendrocyte- and type-2 astrocyte- progenitor cells (e.g, ISBN:9780702028991).") AnnotationAssertion(rdfs:label "oligodendrocyte precursor cell") SubClassOf( ) SubClassOf( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -16219,7 +16186,7 @@ AnnotationAssertion( "From Onard of the FMA: Cardiac muscle cell or cardiac myocyte is a striated muscle cell. Cardiocyte on the other hand is any cell in the heart which includes cells other than muscle cells (e.g. endothelial cell of endocardium). Unless there is a consensus among anatomists that cardiocytes refer only to muscle cells, we will treat them as a general class of cells in the heart.") AnnotationAssertion(rdfs:label "cardiocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adventitial cell) @@ -16278,6 +16245,7 @@ AnnotationAssertion( "2011-02-28T03:48:11Z"^^xsd:dateTime) AnnotationAssertion( "FMA:62104") AnnotationAssertion( "KUPO:0001099") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002543") AnnotationAssertion( "endothelial cell of vein") AnnotationAssertion( "venous endothelial cell") AnnotationAssertion( ) @@ -16287,15 +16255,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (embryonic blood vessel endothelial progenitor cell) - -AnnotationAssertion(Annotation( "GOC:tfm") "An endothelial progenitor cell that participates in angiogenesis during development.") -AnnotationAssertion( ) -AnnotationAssertion( "2011-02-28T04:20:39Z"^^xsd:dateTime) -AnnotationAssertion(rdfs:comment "See CL:0002619.") -AnnotationAssertion(rdfs:label "embryonic blood vessel endothelial progenitor cell") -SubClassOf( ) - # Class: (fibroblast of the aortic adventitia) AnnotationAssertion(Annotation( "GOC:tfm") "A fibroblast of the aortic adventitia.") @@ -16358,6 +16317,7 @@ SubClassOf( ObjectSomeValuesFrom( "GOC:tfm") "A mesenchymal stem cell of adipose tissue.") AnnotationAssertion( ) AnnotationAssertion( "2011-03-01T09:57:17Z"^^xsd:dateTime) +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002570") AnnotationAssertion( "mesenchymal stem cell of adipose") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchymal stem cell of adipose tissue") @@ -16373,6 +16333,7 @@ AnnotationAssertion( AnnotationAssertion( "BTO:0001220") AnnotationAssertion( "CALOHA:TS-0898") AnnotationAssertion( "MESH:D012583") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002573") AnnotationAssertion(Annotation( "PMID:32119275") Annotation( "PMID:38638689") "neurolemmocyte") AnnotationAssertion( ) AnnotationAssertion( ) @@ -16386,6 +16347,7 @@ SubClassOf( ObjectSomeValuesFrom( "GOC:tfm") "A blood vessel endothelial cell that is part of the retina.") AnnotationAssertion( ) AnnotationAssertion( "2011-03-06T03:28:27Z"^^xsd:dateTime) +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002585") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) @@ -16636,6 +16598,22 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (multi-ciliated epithelial cell) + +AnnotationAssertion(Annotation( "CL:CVS") Annotation( "PMID:28400610") Annotation( "PMID:30422572") Annotation( "PMID:38032388") "A columnar/cuboidal epithelial cell with multiple motile cilia on its apical surface. These cells facilitate the movement of liquids such as mucus or cerebrospinal fluid across the epithelial surface.") +AnnotationAssertion( "multi-ciliated cell"@en) +AnnotationAssertion( "multiciliated cell"@en) +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0005012") +AnnotationAssertion( "multiciliated epithelial cell"@en) +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "PMID:22118931") Annotation( "PMID:23959957") Annotation( "PMID:25729351") Annotation( "PMID:26378583") rdfs:comment "While the term 'multi-ciliated epithelial cell' refers to cells with multiple motile cilia, there are exceptions where epithelial cells may have multiple non-motile cilia. Examples include olfactory sensory neurons, which have non-motile cilia for sensory detection, and choroid plexus epithelial cells, which possess multiple non-motile cilia with transient motility during development. Multiciliated cells are essential for human health, and their dysfunction can lead to various diseases known as ciliopathies, such as primary ciliary dyskinesia. This condition affects the respiratory system, brain ventricles, and reproductive system, leading to chronic respiratory infections, hydrocephalus, and infertility") +AnnotationAssertion(rdfs:label "multi-ciliated epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (somatomotor neuron) AnnotationAssertion(Annotation( "ZFIN:CVS") "A motor neuron that innervates a skeletal muscle. These motor neurons are all excitatory and cholinergic.") @@ -16741,6 +16719,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchymal cell") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -16974,6 +16953,7 @@ SubClassOf( ObjectSomeValuesFrom( (neural crest cell) AnnotationAssertion(Annotation( "https://orcid.org/0000-0001-5208-3432") Annotation( "https://orcid.org/0000-0002-9900-7880") "A cell of the neural crest. Neural crest cells are multipotent. Premigratory neural crest cells are found at the neural plate boarder, some of which will undergo ectomesynchymal transition and delamination to form migratory neural crest cells.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0011012") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural crest cell") SubClassOf( ) @@ -17016,6 +16996,7 @@ AnnotationAssertion( "progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -17155,6 +17136,7 @@ SubClassOf( (lung neuroendocrine cell) AnnotationAssertion(Annotation( "PMID:33355253") Annotation( "doi:10.3109/01902148209069653") Annotation( "doi:10.7554/eLife.78216") "A neuroendocrine cell that is part of respiratory epithelium of the lung and is involved in the sensory detection of environmental stimuli, including hypoxia, nicotine and air pressure. Ultrastructurally, this cell type is characterized by the presence of cytoplasmic dense core granules, which are considered the storage sites of amine and peptide hormones. Lung neuroendocrine cells are innervated and appear as solitary cells or as clustered masses, localized at airway bifurcation sites, called neuroepithelial bodies that can release serotonin in response to hypoxia and interact with sensory nerve terminals. Lung neuroendocrine cells also function as reserve stem cells that repair the surrounding epithelium after injury.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_1000223") AnnotationAssertion(Annotation( "PMID:33355253") "pulmonary neuroendocrine cell") AnnotationAssertion( ) AnnotationAssertion( ) @@ -17171,13 +17153,14 @@ SubClassOf( ObjectSomeValuesFrom( (lung ciliated cell) -AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any ciliated cell that is part of some lung.") +AnnotationAssertion(Annotation( "PMID:27864314") "An epithelial cell that is part of the lung epithelium. This cell is characterised by the presence of cilia on its apical surface.") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung ciliated cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung secretory cell) @@ -17186,6 +17169,7 @@ AnnotationAssertion( "lung secretory cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trophectodermal cell) @@ -17348,6 +17332,7 @@ AnnotationAssertion(Annotation( "BTO:0004758") AnnotationAssertion( "FMA:67761") AnnotationAssertion( "KUPO:0001095") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_1000413") AnnotationAssertion( "arterial endothelial cell") AnnotationAssertion( ) AnnotationAssertion( ) @@ -17461,6 +17446,7 @@ SubClassOf( ObjectSomeValuesFrom( "GOC:tfm") "A mesothelial cell that is part of the pleura.") AnnotationAssertion( "FMA:86737") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_1000491") AnnotationAssertion(Annotation( "FMA:86737") "pleural mesothelial cell") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesothelial cell of pleura") @@ -17481,6 +17467,7 @@ SubClassOf( ObjectSomeValuesFrom( "GOC:tfm") "A mesothelial cell that is part of the visceral pleura.") AnnotationAssertion( "FMA:86739") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_1000493") AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesothelial cell of visceral pleura") @@ -17538,7 +17525,7 @@ SubClassOf( ObjectSomeValuesFrom( (cerebral cortex endothelial cell) -AnnotationAssertion(Annotation( "NPX:PDR") "Endothelial cells forming the walls of the capillaries within the cerebral cortex.") +AnnotationAssertion(Annotation( "NPX:PDR") "A distinct endothelial cell forming the walls of the capillaries within the cerebral cortex.") AnnotationAssertion( "CALOHA:TS-2372") AnnotationAssertion(Annotation( "CALOHA:TS-2372") "cerebral cortex endothelial cells") AnnotationAssertion(Annotation( "CALOHA:TS-2372") "endothelial cells of cerebral cortex") @@ -17659,7 +17646,7 @@ AnnotationAssertion( AnnotationAssertion( "CL:2000020") AnnotationAssertion(rdfs:label "inner cell mass cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac septum cell) @@ -18170,6 +18157,18 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (syncytial cell) + +AnnotationAssertion(Annotation( "PMID:20851884") Annotation( "Wikipedia:Syncytium") "A multinucleate cell formed by the fusion of multiple uninuclear cells through plasma membrane fusion. This process leads to a single large cell containing multiple nuclei within a shared cytoplasm.") +AnnotationAssertion( ) +AnnotationAssertion( "2024-08-15T10:38:46Z"^^xsd:dateTime) +AnnotationAssertion(Annotation( "WBbt:0008074") "syncytium") +AnnotationAssertion(rdfs:label "syncytial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (vacuole inheritance) AnnotationAssertion(Annotation( "GOC:mcc") Annotation( "PMID:10873824") Annotation( "PMID:14616069") "The distribution of vacuoles into daughter cells after mitosis or meiosis, mediated by interactions between vacuoles and the cytoskeleton.") @@ -18325,7 +18324,7 @@ AnnotationAssertion( "GO:0000785") AnnotationAssertion(rdfs:comment "Chromosomes include parts that are not part of the chromatin. Examples include the kinetochore.") AnnotationAssertion(rdfs:label "chromatin") -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (heterochromatin) @@ -22059,26 +22058,6 @@ AnnotationAssertion(rdfs:label "nucl EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (DNA metabolic process) - -AnnotationAssertion(Annotation( "ISBN:0198506732") "Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.") -AnnotationAssertion( "GO:0055132") -AnnotationAssertion( "DNA metabolism") -AnnotationAssertion( "cellular DNA metabolism") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0006259") -AnnotationAssertion( ) -AnnotationAssertion( ) -AnnotationAssertion( ) -AnnotationAssertion( ) -AnnotationAssertion( ) -AnnotationAssertion( ) -AnnotationAssertion( ) -AnnotationAssertion( ) -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "DNA metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (chromatin organization) AnnotationAssertion(Annotation( "PMID:20404130") "The assembly or remodeling of chromatin composed of DNA complexed with histones, other associated proteins, and sometimes RNA.") @@ -22768,7 +22747,6 @@ AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "response to stress") SubClassOf( ) @@ -23293,7 +23271,16 @@ AnnotationAssertion( "gamete generation") SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (germ cell development) @@ -23843,6 +23830,8 @@ AnnotationAssertion( "axo-dendritic transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) # Class: (anterograde axonal transport) @@ -23962,16 +23951,6 @@ AnnotationAssertion(rdfs:comment "Th AnnotationAssertion(rdfs:label "cell death") SubClassOf( ) -# Class: (sulfate transport) - -AnnotationAssertion(Annotation( "GOC:krc") "The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion( "GO:0006870") -AnnotationAssertion( "sulphate transport") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0008272") -AnnotationAssertion(rdfs:label "sulfate transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (cell population proliferation) AnnotationAssertion(Annotation( "GOC:mah") Annotation( "GOC:mb") "The multiplication or reproduction of cells, resulting in the expansion of a cell population.") @@ -24611,7 +24590,6 @@ EquivalentClasses( ObjectIntersection # Class: (alkaloid biosynthetic process) AnnotationAssertion(Annotation( "GOC:lr") Annotation( "ISBN:0122146743") "The chemical reactions and pathways resulting in the formation of alkaloids, nitrogen-containing natural products which are not otherwise classified as nonprotein amino acids, amines, peptides, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones, or primary metabolite (such as purine or pyrimidine bases).") -AnnotationAssertion( "UM-BBD_enzymeID:e0711") AnnotationAssertion( "alkaloid anabolism") AnnotationAssertion( "alkaloid biosynthesis") AnnotationAssertion( "alkaloid formation") @@ -24957,18 +24935,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (response to organonitrogen compound) - -AnnotationAssertion(Annotation( "PMID:9869419") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organonitrogen stimulus. An organonitrogen compound is formally a compound containing at least one carbon-nitrogen bond.") -AnnotationAssertion( "response to organic nitrogen") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0010243") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "response to organonitrogen compound") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - # Class: (endomembrane system organization) AnnotationAssertion(Annotation( "GOC:mah") Annotation( "GOC:sm") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endomembrane system.") @@ -26809,17 +26775,6 @@ AnnotationAssertion(rdfs:label "nucl EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (protein-DNA complex transport) - -AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of protein-DNA complexes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion(Annotation( "GOC:mah") "DNA-protein complex transport") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0015869") -AnnotationAssertion(rdfs:label "protein-DNA complex transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (acetylcholine transport) AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of acetylcholine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.") @@ -27136,6 +27091,15 @@ AnnotationAssertion( "GO:0017145") AnnotationAssertion(rdfs:label "stem cell division") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (negative regulation of translation) @@ -31282,16 +31246,6 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (protein-DNA complex disassembly) - -AnnotationAssertion(Annotation( "GOC:mah") "The disaggregation of a protein-DNA complex into its constituent components.") -AnnotationAssertion(Annotation( "GOC:mah") "DNA-protein complex disassembly") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0032986") -AnnotationAssertion(rdfs:label "protein-DNA complex disassembly") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - # Class: (protein-RNA complex disassembly) AnnotationAssertion(Annotation( "GOC:mah") "The disaggregation of a protein-RNA complex into its constituent components.") @@ -31338,19 +31292,6 @@ SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) -# Class: (protein-DNA complex) - -AnnotationAssertion(Annotation( "GOC:mah") "A macromolecular complex containing both protein and DNA molecules.") -AnnotationAssertion(Annotation( "GOC:mah") "DNA-protein complex") -AnnotationAssertion( "cellular_component") -AnnotationAssertion( "GO:0032993") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:comment "Note that this term is intended to classify complexes that have DNA as one of the members of the complex, that is, the complex does not exist if DNA is not present. Protein complexes that interact with DNA e.g. transcription factor complexes should not be classified here.") -AnnotationAssertion(rdfs:label "protein-DNA complex") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (muscle cell proliferation) AnnotationAssertion(Annotation( "CL:0000187") Annotation( "GOC:mah") "The expansion of a muscle cell population by cell division.") @@ -33254,7 +33195,6 @@ AnnotationAssertion( "GO:0042430") AnnotationAssertion(rdfs:label "indole-containing compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) # Class: (indole-containing compound biosynthetic process) @@ -33800,6 +33740,7 @@ AnnotationAssertion( "membrane-enclosed organelle") AnnotationAssertion( "cellular_component") AnnotationAssertion( "GO:0043227") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "membrane-bounded organelle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -33813,6 +33754,7 @@ AnnotationAssertion( "cellular_component") AnnotationAssertion( "biological condensate") AnnotationAssertion( "GO:0043228") +AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-membrane-bounded organelle") SubClassOf( ) @@ -33822,6 +33764,7 @@ SubClassOf( "GOC:go_curators") "Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.") AnnotationAssertion( "cellular_component") AnnotationAssertion( "GO:0043229") +AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intracellular organelle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -34385,6 +34328,7 @@ AnnotationAssertion( "cellular component biogenesis at cellular level") AnnotationAssertion( "biological_process") AnnotationAssertion( "GO:0044085") +AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cellular component biogenesis") SubClassOf( ) @@ -39208,7 +39152,6 @@ AnnotationAssertion( "GO:0050908") AnnotationAssertion(rdfs:label "detection of light stimulus involved in visual perception") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) # Class: (sensory perception of taste) @@ -39355,14 +39298,6 @@ AnnotationAssertion( "sensory perception of touch") SubClassOf( ) -# Class: (DNA transport) - -AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of RNA, deoxyribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0051027") -AnnotationAssertion(rdfs:label "DNA transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (regulation of secretion) AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of the controlled release of a substance from a cell or a tissue.") @@ -39440,43 +39375,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (regulation of DNA metabolic process) - -AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving DNA.") -AnnotationAssertion( "regulation of DNA metabolism") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0051052") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "regulation of DNA metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (negative regulation of DNA metabolic process) - -AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving DNA.") -AnnotationAssertion( "down regulation of DNA metabolic process") -AnnotationAssertion( "down-regulation of DNA metabolic process") -AnnotationAssertion( "downregulation of DNA metabolic process") -AnnotationAssertion( "negative regulation of DNA metabolism") -AnnotationAssertion( "inhibition of DNA metabolic process") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0051053") -AnnotationAssertion(rdfs:label "negative regulation of DNA metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (positive regulation of DNA metabolic process) - -AnnotationAssertion(Annotation( "GOC:ai") "Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving DNA.") -AnnotationAssertion( "positive regulation of DNA metabolism") -AnnotationAssertion( "up regulation of DNA metabolic process") -AnnotationAssertion( "up-regulation of DNA metabolic process") -AnnotationAssertion( "upregulation of DNA metabolic process") -AnnotationAssertion( "activation of DNA metabolic process") -AnnotationAssertion( "stimulation of DNA metabolic process") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0051054") -AnnotationAssertion(rdfs:label "positive regulation of DNA metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (negative regulation of lipid biosynthetic process) AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.") @@ -44665,17 +44563,6 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (protein-DNA complex assembly) - -AnnotationAssertion(Annotation( "GOC:jl") "The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex.") -AnnotationAssertion(Annotation( "GOC:mah") "DNA-protein complex assembly") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0065004") -AnnotationAssertion(rdfs:label "protein-DNA complex assembly") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (biological regulation) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:isa_complete") Annotation( "GOC:mah") Annotation( "GOC:pr") Annotation( "GOC:vw") "Any process that modulates a measurable attribute of any biological process, quality or function.") @@ -45296,7 +45183,7 @@ AnnotationAssertion( "2010-03-08T03:56:28Z") AnnotationAssertion( "biological_process") AnnotationAssertion( "GO:0071705") -AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nitrogen compound transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -45366,19 +45253,6 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "protein transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -# Class: (protein-DNA complex organization) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA complex.") -AnnotationAssertion( "mah") -AnnotationAssertion( "2010-09-08T10:03:26Z") -AnnotationAssertion(Annotation( "GOC:mah") "DNA-protein complex subunit organization") -AnnotationAssertion(Annotation( "GOC:mah") "protein-DNA complex subunit organisation") -AnnotationAssertion( "protein-DNA complex subunit organization") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0071824") -AnnotationAssertion(rdfs:label "protein-DNA complex organization") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (protein-RNA complex organization) AnnotationAssertion(Annotation( "GOC:mah") "Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a ribonucleoprotein complex.") @@ -45461,20 +45335,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectAllValuesFrom( )) -# Class: (DNA biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:mah") "The biosynthetic process resulting in the formation of DNA.") -AnnotationAssertion( "mah") -AnnotationAssertion( "2010-09-15T02:14:33Z") -AnnotationAssertion(Annotation( "GOC:mah") "DNA anabolism") -AnnotationAssertion(Annotation( "GOC:mah") "DNA biosynthesis") -AnnotationAssertion(Annotation( "GOC:mah") "DNA formation") -AnnotationAssertion(Annotation( "GOC:mah") "DNA synthesis") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:0071897") -AnnotationAssertion(rdfs:label "DNA biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (cell periphery) AnnotationAssertion(Annotation( "GOC:pdt") "The broad region around and including the plasma membrane of a cell, encompassing the cell cortex (inside the cell), the plasma membrane, and any external encapsulating structures.") @@ -47786,7 +47646,7 @@ SubClassOf( "GOC:dos") "The pathway leading to secretion of a neurotransmitter from the presynapse as part of synaptic transmission.") AnnotationAssertion( "biological_process") AnnotationAssertion( "GO:0099531") -AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "presynaptic process involved in chemical synaptic transmission") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) @@ -49759,7 +49619,6 @@ AnnotationAssertion( "GO:1901160") AnnotationAssertion(rdfs:label "primary amino compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) # Class: (primary amino compound biosynthetic process) @@ -50272,34 +50131,6 @@ AnnotationAssertion( "positive regulation of endothelial cell development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (organonitrogen compound metabolic process) - -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:pr") "The chemical reactions and pathways involving organonitrogen compound.") -AnnotationAssertion( "pr") -AnnotationAssertion( "2012-11-04T15:17:52Z") -AnnotationAssertion(Annotation( "GOC:TermGenie") "organonitrogen compound metabolism") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:1901564") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "organonitrogen compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (organonitrogen compound biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:pr") "The chemical reactions and pathways resulting in the formation of organonitrogen compound.") -AnnotationAssertion( "pr") -AnnotationAssertion( "2012-11-04T15:18:00Z") -AnnotationAssertion(Annotation( "GOC:TermGenie") "organonitrogen compound anabolism") -AnnotationAssertion(Annotation( "GOC:TermGenie") "organonitrogen compound biosynthesis") -AnnotationAssertion(Annotation( "GOC:TermGenie") "organonitrogen compound formation") -AnnotationAssertion(Annotation( "GOC:TermGenie") "organonitrogen compound synthesis") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:1901566") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "organonitrogen compound biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - # Class: (dendritic microtubule) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "NIF_Subcellular:sao110773650") "Any microtubule in a dendrite, a neuron projection.") @@ -51399,6 +51230,7 @@ EquivalentClasses( ObjectIntersection AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:dph") Annotation( "PMID:9055073") "The directed movement of sulfate across a membrane.") AnnotationAssertion( "dph") AnnotationAssertion( "2013-08-14T14:46:04Z") +AnnotationAssertion( "sulphate transport") AnnotationAssertion( "biological_process") AnnotationAssertion( "GO:1902358") AnnotationAssertion(rdfs:label "sulfate transmembrane transport") @@ -52593,6 +52425,17 @@ AnnotationAssertion( "positive regulation of endodermal cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (multi-ciliated epithelial cell differentiation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:sp") Annotation( "GO_REF:0000086") Annotation( "PMID:22231168") Annotation( "PMID:24934224") "The process in which a relatively unspecialized cell acquires the specialized features of a multi-ciliated epithelial cell.") +AnnotationAssertion( "tb") +AnnotationAssertion( "2014-08-05T19:21:21Z") +AnnotationAssertion( "multiciliate cell differentiation") +AnnotationAssertion( "biological_process") +AnnotationAssertion( "GO:1903251") +AnnotationAssertion(rdfs:label "multi-ciliated epithelial cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (protein localization to Golgi membrane) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000087") Annotation( "PMID:11378902") "A process in which a protein is transported to, or maintained in, a location within a Golgi membrane.") @@ -53676,9 +53519,18 @@ AnnotationAssertion( "epithelial cell apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (regulation of collagen fibril organization) @@ -58510,34 +58362,6 @@ AnnotationAssertion( "positive regulation of fibroblast apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (regulation of DNA biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:obol") "Any process that modulates the frequency, rate or extent of DNA biosynthetic process.") -AnnotationAssertion( "yaf") -AnnotationAssertion( "2010-12-08T04:48:15Z") -AnnotationAssertion(Annotation( "GOC:obol") "regulation of DNA anabolism") -AnnotationAssertion(Annotation( "GOC:obol") "regulation of DNA biosynthesis") -AnnotationAssertion(Annotation( "GOC:obol") "regulation of DNA formation") -AnnotationAssertion(Annotation( "GOC:obol") "regulation of DNA synthesis") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:2000278") -AnnotationAssertion(rdfs:label "regulation of DNA biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (negative regulation of DNA biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:obol") "Any process that stops, prevents or reduces the frequency, rate or extent of DNA biosynthetic process.") -AnnotationAssertion( "yaf") -AnnotationAssertion( "2010-12-08T04:48:20Z") -AnnotationAssertion(Annotation( "GOC:obol") "negative regulation of DNA anabolism") -AnnotationAssertion(Annotation( "GOC:obol") "negative regulation of DNA biosynthesis") -AnnotationAssertion(Annotation( "GOC:obol") "negative regulation of DNA formation") -AnnotationAssertion(Annotation( "GOC:obol") "negative regulation of DNA synthesis") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:2000279") -AnnotationAssertion(rdfs:label "negative regulation of DNA biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (regulation of cellular amino acid biosynthetic process) AnnotationAssertion(Annotation( "GOC:obol") "Any process that modulates the frequency, rate or extent of cellular amino acid biosynthetic process.") @@ -58894,20 +58718,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (positive regulation of DNA biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:obol") "Any process that activates or increases the frequency, rate or extent of DNA biosynthetic process.") -AnnotationAssertion( "yaf") -AnnotationAssertion( "2011-04-04T10:01:20Z") -AnnotationAssertion(Annotation( "GOC:obol") "positive regulation of DNA anabolism") -AnnotationAssertion(Annotation( "GOC:obol") "positive regulation of DNA biosynthesis") -AnnotationAssertion(Annotation( "GOC:obol") "positive regulation of DNA formation") -AnnotationAssertion(Annotation( "GOC:obol") "positive regulation of DNA synthesis") -AnnotationAssertion( "biological_process") -AnnotationAssertion( "GO:2000573") -AnnotationAssertion(rdfs:label "positive regulation of DNA biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (negative regulation of stem cell proliferation) AnnotationAssertion(Annotation( "GOC:dph") "Any process that stops, prevents or reduces the frequency, rate or extent of stem cell proliferation.") @@ -61302,7 +61112,7 @@ AnnotationAssertion( "submucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peripheral nervous system) @@ -61505,7 +61315,7 @@ AnnotationAssertion( "compound eye") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (camera-type eye) @@ -61604,7 +61414,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tube) @@ -61649,7 +61459,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "appendage") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria) @@ -61739,7 +61549,7 @@ AnnotationAssertion( "head") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (serous membrane) @@ -61795,7 +61605,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -62138,7 +61948,7 @@ AnnotationAssertion( "subdivision of skeletal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external ectoderm) @@ -62547,7 +62357,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (neurula stage) @@ -62565,7 +62375,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (organogenesis stage) @@ -62585,7 +62395,7 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung connective tissue) @@ -62707,7 +62517,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neural nucleus") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial nerve nucleus) @@ -62733,7 +62543,7 @@ AnnotationAssertion( "anterior region of body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior region of body) @@ -62741,7 +62551,7 @@ AnnotationAssertion( "UBERON:0000154") AnnotationAssertion(rdfs:label "posterior region of body") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (membranous layer) @@ -62825,7 +62635,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oral opening) @@ -62981,7 +62791,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (pallium) @@ -63128,7 +62938,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (parenchyma) @@ -63152,7 +62962,7 @@ AnnotationAssertion( "UBERON:0000353") AnnotationAssertion(rdfs:label "parenchyma") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -63205,7 +63015,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -63415,7 +63225,7 @@ AnnotationAssertion( "musculature of body") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -63975,7 +63785,7 @@ EquivalentClasses( ObjectUnionOf( SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (simple cuboidal epithelium) @@ -64201,7 +64011,7 @@ AnnotationAssertion( "abdomen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryo) @@ -64274,7 +64084,7 @@ AnnotationAssertion( "Classically the germ layers are ectoderm, mesoderm and endoderm. Alternatively: primary = ectoderm, endoderm; secondary=mesoderm; tertiary=dorsal mesoderm, NC[https://github.com/obophenotype/uberon/wiki/The-neural-crest]") AnnotationAssertion(rdfs:label "germ layer") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectoderm) @@ -64418,7 +64228,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach) @@ -64462,7 +64272,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -64550,7 +64360,7 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -64585,7 +64395,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "endocrine system") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -65010,7 +64820,7 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -65093,7 +64903,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -65254,7 +65064,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -65337,7 +65147,7 @@ AnnotationAssertion( "respiratory system") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -65434,7 +65244,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "circulatory system") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -65559,14 +65369,13 @@ AnnotationAssertion( "UBERON:0001016") AnnotationAssertion( ) AnnotationAssertion( ) -AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -65623,7 +65432,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nerve fasciculus) @@ -65778,7 +65587,7 @@ AnnotationAssertion( "gustatory system") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -65876,7 +65685,7 @@ AnnotationAssertion(rdfs:comment AnnotationAssertion(rdfs:label "chordate pharynx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagus) @@ -66368,7 +66177,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac muscle tissue) @@ -66542,7 +66351,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsum") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (ovarian vein) @@ -67093,7 +66902,7 @@ AnnotationAssertion( "bone element") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) @@ -67483,7 +67292,7 @@ AnnotationAssertion( "digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -68096,7 +67905,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (right pulmonary artery) @@ -68257,7 +68066,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -68406,7 +68215,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -70048,7 +69857,7 @@ AnnotationAssertion( "neocortex") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood plasma) @@ -70413,7 +70222,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary artery) @@ -70533,7 +70342,7 @@ AnnotationAssertion( "accessory XI nerve") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gray matter) @@ -70606,7 +70415,7 @@ AnnotationAssertion( "hindbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -70724,7 +70533,7 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -71269,7 +71078,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (brain dura mater) @@ -71838,7 +71647,7 @@ AnnotationAssertion( "UBERON:0002193") AnnotationAssertion(rdfs:label "hemolymphoid system") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (integument) @@ -71872,7 +71681,7 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of head) @@ -72061,7 +71870,7 @@ AnnotationAssertion( "synovial joint") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -72510,7 +72319,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -72551,7 +72360,7 @@ AnnotationAssertion(rdfs:comment AnnotationAssertion(rdfs:label "somite") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exocrine system) @@ -72572,7 +72381,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "exocrine system") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -72639,7 +72448,7 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -73296,7 +73105,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "connective tissue") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle tissue) @@ -73324,7 +73133,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -73370,7 +73179,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) @@ -73623,7 +73432,7 @@ AnnotationAssertion( "autonomic nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (integumental system) @@ -73735,7 +73544,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin gland) @@ -73967,7 +73776,7 @@ AnnotationAssertion( "bone tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (iris epithelium) @@ -74133,7 +73942,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gland") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -74178,7 +73987,7 @@ AnnotationAssertion( "arthropod sensillum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch) @@ -74214,7 +74023,7 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial placode) @@ -74233,7 +74042,7 @@ AnnotationAssertion( "cranial placode") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical cavity) @@ -74323,7 +74132,7 @@ AnnotationAssertion( "cervical spinal cord") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (left cerebral hemisphere) @@ -74785,7 +74594,7 @@ AnnotationAssertion( "axial mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal placode complex) @@ -74927,7 +74736,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -75038,7 +74847,7 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome) @@ -75141,7 +74950,7 @@ AnnotationAssertion( "sclerotome") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial neural crest) @@ -75266,7 +75075,7 @@ AnnotationAssertion( "mesenchyme") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -75295,7 +75104,7 @@ AnnotationAssertion( "dermatocranium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch 3) @@ -75594,7 +75403,7 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (reproductive organ) @@ -77915,7 +77724,7 @@ AnnotationAssertion( "recurrent laryngeal nerve") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -78449,7 +78258,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stroma") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (axial muscle) @@ -78868,7 +78677,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cortical intermediate zone") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neural tube ventricular layer) @@ -79050,7 +78859,7 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of iris) @@ -79250,7 +79059,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac vein) @@ -80880,7 +80689,7 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -81106,7 +80915,7 @@ AnnotationAssertion( "cartilaginous neurocranium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intramembranous bone tissue) @@ -81183,7 +80992,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -81758,7 +81567,7 @@ AnnotationAssertion( "chordamesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung mesenchyme) @@ -81898,7 +81707,7 @@ AnnotationAssertion( "organ component layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of pharynx) @@ -82139,7 +81948,7 @@ AnnotationAssertion( "muscle structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (right horn of sinus venosus) @@ -82952,7 +82761,7 @@ AnnotationAssertion( "cervical region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (jugular foramen) @@ -83736,7 +83545,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84222,7 +84031,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (unmyelinated nerve fiber) @@ -84490,7 +84299,7 @@ AnnotationAssertion( "The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus.") AnnotationAssertion(rdfs:label "notochordal process") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pleuroperitoneal canal) @@ -84510,7 +84319,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84694,7 +84503,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pharynx") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (tunica media of pulmonary trunk) @@ -84768,7 +84577,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive blood) @@ -84817,7 +84626,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive mesoderm) @@ -84834,7 +84643,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular symphysis) @@ -84924,7 +84733,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (median lingual swelling) @@ -85040,7 +84849,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (surface groove) @@ -85920,7 +85729,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive hindbrain) @@ -86154,7 +85963,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enveloping layer of ectoderm) @@ -86202,7 +86011,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of midbrain tegmentum) @@ -86542,7 +86351,7 @@ AnnotationAssertion( "transudate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -86634,7 +86443,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (girdle bone/zone) @@ -86808,7 +86617,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (surface of cartilage) @@ -86963,7 +86772,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic head) @@ -87987,7 +87796,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial mesenchyme) @@ -88386,7 +88195,7 @@ AnnotationAssertion( "aortic system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (genital artery) @@ -88819,7 +88628,7 @@ AnnotationAssertion( "cranial skeletal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (paired limb/fin bud mesenchyme) @@ -89010,7 +88819,7 @@ AnnotationAssertion( "UBERON:0010362") AnnotationAssertion(rdfs:label "endoskeleton") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endochondral element) @@ -89038,7 +88847,7 @@ AnnotationAssertion( "This ontology covers metazoa, so we do not use exoskeleton as primary label, as in VSAO") AnnotationAssertion(rdfs:label "dermal skeleton") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (ecto-epithelium) @@ -89219,7 +89028,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral complex) @@ -89741,7 +89550,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future lower lip) @@ -90215,7 +90024,7 @@ AnnotationAssertion(Annotation( "UBERON:0011997") AnnotationAssertion(rdfs:label "coelom") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (myocoele) @@ -90330,7 +90139,7 @@ AnnotationAssertion( "embryonic facial prominence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical artery) @@ -90408,7 +90217,7 @@ AnnotationAssertion(rdfs:comment AnnotationAssertion(rdfs:label "subserosa") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -90755,7 +90564,7 @@ AnnotationAssertion( ) AnnotationAssertion(rdfs:label "main body axis") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (body proper) @@ -91372,7 +91181,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -91532,7 +91341,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (circulatory organ) @@ -92478,7 +92287,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (integumental taste bud)