From d0993eff17fb625c46e9c2d9f90d63f671e96b18 Mon Sep 17 00:00:00 2001 From: kimrutherford Date: Sun, 8 Sep 2024 02:58:40 +0000 Subject: [PATCH] updated to last revision --- results/all_qualifier_changes_file.tsv | 74 ++++++++++++++++++++++++++ 1 file changed, 74 insertions(+) diff --git a/results/all_qualifier_changes_file.tsv b/results/all_qualifier_changes_file.tsv index 37bd5d2..ee10a55 100644 --- a/results/all_qualifier_changes_file.tsv +++ b/results/all_qualifier_changes_file.tsv @@ -1,4 +1,78 @@ revision user date chromosome systematic_id primary_name feature_type qualifier_type added_or_removed value +10072 kmr44 2024-09-06 I SPAC11D3.01c CDS controlled_curation removed term=similar to S. pombe SPAC869.09 and SPAC22G7.11C; date=19700101 +10072 kmr44 2024-09-06 I SPAC11D3.05 mfs2 CDS controlled_curation removed term=similar to S. pombe SPCC794.04c and SPBC530.02; date=20220422 +10072 kmr44 2024-09-06 I SPAC11D3.09 agm1 CDS controlled_curation removed term=similar to S. pombe SPAPB24D3.03 and SPBC8E4.03 (paralog); date=19700101 +10072 kmr44 2024-09-06 I SPAC11D3.10 CDS controlled_curation removed term=similar to S. pombe SPCC777.03c (paralog); date=19700101 +10072 kmr44 2024-09-06 I SPAC11D3.11c CDS controlled_curation removed term=similar to S. pombe SPCC757.04; date=19700101 +10072 kmr44 2024-09-06 I SPAC12G12.09 eti1 CDS controlled_curation removed term=similar to S. pombe SPAC20G4.08 (paralog); date=20090811 +10072 kmr44 2024-09-06 I SPAC13G6.08 fzr2 CDS controlled_curation removed term=similar to S. pombe SPCC1620.04C; date=19700101 +10072 kmr44 2024-09-06 I SPAC1486.10 thi1 CDS controlled_curation removed term=similar to S. pombe SPAC3C7.04 and SPBP8B7.30c and SPCC417.09C; date=19700101 +10072 kmr44 2024-09-06 I SPAC1527.01 mok11 CDS controlled_curation removed term=similar to S. pombe SPCC1281.01 and SPBC32H8.13c and SPBC16D10.05 and SPCC63.04; date=19700101 +10072 kmr44 2024-09-06 I SPAC16C9.07 pom2 CDS controlled_curation removed term=similar to S. pombe pom1 (paralog); date=19700101 +10072 kmr44 2024-09-06 I SPAC1783.01 CDS controlled_curation removed term=similar to S. pombe SPBC12C2.03c (paralog); date=19700101 +10072 kmr44 2024-09-06 I SPAC17A2.01 bsu1 CDS controlled_curation removed term=similar to S. pombe SPCC576.17c and SPCC965.13; date=19700101 +10072 kmr44 2024-09-06 I SPAC1834.08 mak1 CDS controlled_curation removed term=similar to S. pombe Mak2 and Mak3; date=19700101 +10072 kmr44 2024-09-06 I SPAC186.02c CDS controlled_curation removed term=similar to S. pombe SPAC186.07C; date=19700101 +10072 kmr44 2024-09-06 I SPAC186.07c CDS controlled_curation removed term=similar to S. pombe SPAC186.02C; date=19700101 +10072 kmr44 2024-09-06 I SPAC186.09 pdc102 CDS controlled_curation removed term=similar to S. pombe SPAC1F8.07c (paralog); date=19700101 +10072 kmr44 2024-09-06 I SPAC18B11.11 CDS controlled_curation removed term=similar to S. pombe SPAC630.13c; date=19700101 +10072 kmr44 2024-09-06 I SPAC1952.10c CDS controlled_curation removed term=similar to S. pombe SPAC23H3.04; date=19700101 +10072 kmr44 2024-09-06 I SPAC1F8.07c pdc101 CDS controlled_curation removed term=similar to S. pombe SPAC186.09; date=20120511 +10072 kmr44 2024-09-06 I SPAC20G8.08c fft1 CDS controlled_curation removed term=similar to S. pombe SPCC1235.05C and SPAC25A8.01C; date=19700101 +10072 kmr44 2024-09-06 I SPAC212.11 tlh1 CDS controlled_curation removed term=similar to S. pombe SPBCPT2R1.08c; date=19700101 +10072 kmr44 2024-09-06 I SPAC22G7.11c cum1 CDS controlled_curation removed term=similar to S. pombe SPAC869.09 and SPAC11D3.01C; date=19700101 +10072 kmr44 2024-09-06 I SPAC23H3.04 CDS controlled_curation removed term=similar to S. pombe SPAC1952.10C (paralog); date=19700101 +10072 kmr44 2024-09-06 I SPAC26A3.10 cnt6 CDS controlled_curation removed term=similar to S. pombe SPBC17G9.08c; date=19700101 +10072 kmr44 2024-09-06 I SPAC27D7.09c CDS controlled_curation removed term=similar to S. pombe SPAC27D7.11c and SPBC3D6.02 (paralogs); date=19700101 +10072 kmr44 2024-09-06 I SPAC27D7.11c CDS controlled_curation removed term=similar to S. pombe SPAC27D7.09c and SPBC3D6.02 (paralogs); date=19700101 +10072 kmr44 2024-09-06 I SPAC30D11.01c gto2 CDS controlled_curation removed term=similar to S. pombe SPAPB24D3.10c and SPAC1039.11c; date=19700101 +10072 kmr44 2024-09-06 I SPAC3C7.04 CDS controlled_curation removed term=similar to S. pombe SPAC1486.10 and SPCC417.09C and SPBP8B7.30C; date=19700101 +10072 kmr44 2024-09-06 I SPAC3H8.08c CDS controlled_curation removed term=similar to S. pombe SPBC16G5.17; date=19700101 +10072 kmr44 2024-09-06 I SPAC5H10.03 CDS controlled_curation removed term=similar to S. pombe SPAC513.02; date=19700101 +10072 kmr44 2024-09-06 I SPAC630.13c tsc2 CDS controlled_curation removed term=similar to S. pombe SPAC18B11.11; date=19700101 +10072 kmr44 2024-09-06 I SPAC750.02c CDS controlled_curation removed term=similar to S. pombe SPBC1348.05 and SPAPB1A11.01 and SPBPB2B2.16c and SPCC1529.01; date=19700101 +10072 kmr44 2024-09-06 I SPAC750.03c CDS controlled_curation removed term=similar to S. pombe SPBC1348.04 and SPAC977.03; date=19700101 +10072 kmr44 2024-09-06 I SPAC869.09 CDS controlled_curation removed term=similar to S. pombe SPAC22G7.11C and SPAC11D3.01C; date=19700101 +10072 kmr44 2024-09-06 I SPAC977.03 CDS controlled_curation removed term=similar to S. pombe SPBC1348.04 and SPAC750.03C; date=19700101 +10072 kmr44 2024-09-06 I SPAPB1A11.01 mfc1 CDS controlled_curation removed term=similar to S. pombe SPBC1348.05 and SPCC1529.01 and SPBPB2B2.16c and SPAC750.02c; date=19700101 +10072 kmr44 2024-09-06 I SPAPB24D3.03 agm2 CDS controlled_curation removed term=similar to S. pombe SPAC11D3.09 and SPBC8E4.03; date=19700101 +10072 kmr44 2024-09-06 I SPAPB24D3.10c agl1 CDS controlled_curation removed term=similar to S. pombe SPAC30D11.01c and SPAC1039.11c; date=19700101 +10072 kmr44 2024-09-06 III SPCC1281.01 ags1 CDS controlled_curation removed term=similar to S. pombe SPAC1527.01 and SPBC32H8.13c and SPBC16D10.05 and SPCC63.04; date=20111214 +10072 kmr44 2024-09-06 III SPCC1529.01 CDS controlled_curation removed term=similar to S. pombe SPBC1348.05 and SPAPB1A11.01 and SPBPB2B2.16c and SPAC750.02c; date=19700101 +10072 kmr44 2024-09-06 III SPCC1620.04c fzr3 CDS controlled_curation removed term=similar to S. pombe SPAC13G6.08; date=19700101 +10072 kmr44 2024-09-06 III SPCC1682.06 CDS controlled_curation removed term=similar to S. pombe SPBC18H10.18C; date=19700101 +10072 kmr44 2024-09-06 III SPCC330.07c CDS controlled_curation removed term=similar to S. pombe SPCC613.02 and SPCC613.01 and SPCC757.11C; date=19700101 +10072 kmr44 2024-09-06 III SPCC417.09c CDS controlled_curation removed term=similar to S. pombe SPAC3C7.04 and SPAC1486.10 and SPBP8B7.30C (paralogs); date=19700101 +10072 kmr44 2024-09-06 III SPCC4G3.07c phf1 CDS controlled_curation removed term=similar to S. pombe SPAC30D11.08c (paralog); date=19700101 +10072 kmr44 2024-09-06 III SPCC576.17c CDS controlled_curation removed term=similar to S. pombe SPAC17A2.01 and SPCC965.13; date=19700101 +10072 kmr44 2024-09-06 III SPCC613.01 CDS controlled_curation removed term=similar to S. pombe SPCC613.02 and SPCC330.07c and SPCC757.11c (paralogs); date=19700101 +10072 kmr44 2024-09-06 III SPCC613.02 CDS controlled_curation removed term=similar to S. pombe SPCC613.01 and SPCC330.07c and SPCC757.11c (paralogs); date=19700101 +10072 kmr44 2024-09-06 III SPCC622.03c CDS controlled_curation removed term=similar to S. pombe SPCC622.06c; date=19700101 +10072 kmr44 2024-09-06 III SPCC622.06c CDS controlled_curation removed term=similar to S. pombe SPCC622.03c; date=19700101 +10072 kmr44 2024-09-06 III SPCC63.04 mok14 CDS controlled_curation removed term=similar to S. pombe SPAC1527.01 and SPCC1281.01 and SPBC32H8.13c and SPBC16D10.05; date=19700101 +10072 kmr44 2024-09-06 III SPCC757.11c CDS controlled_curation removed term=similar to S. pombe SPCC613.02 and SPCC613.01 and SPCC330.07c; date=19700101 +10072 kmr44 2024-09-06 III SPCC777.03c CDS controlled_curation removed term=similar to S. pombe SPAC11D3.10; date=19700101 +10072 kmr44 2024-09-06 III SPCC794.04c CDS controlled_curation removed term=similar to S. pombe SPAC11D3.05 and SPBC530.02; date=20220422 +10072 kmr44 2024-09-06 III SPCC965.13 CDS controlled_curation removed term=similar to S. pombe SPAC17A2.01 and SPCC576.17c; date=19700101 +10070 vw253 2024-09-05 I SPAP11E10.02c mam3 CDS controlled_curation added term=misc, repeat containing; cv=misc; date=19700101 +10070 vw253 2024-09-05 I SPAP11E10.02c mam3 CDS controlled_curation removed term=misc, repeat containing; cv=sequence_feature; date=19700101 +10068 vw253 2024-09-04 I SPAC1006.08 etd1 CDS controlled_curation added term=species distribution, no apparent S. cerevisiae ortholog; date=20240506 +10068 vw253 2024-09-04 I SPAC30C2.03 CDS colour added 10 +10068 vw253 2024-09-04 I SPAC30C2.03 CDS colour removed 7 +10068 vw253 2024-09-04 I SPAC30C2.03 CDS controlled_curation added term=species distribution, orthologs cannot be distinguished; date=20240506 +10068 vw253 2024-09-04 I SPAC30C2.03 CDS controlled_curation removed term=conserved in bacteria; date=20240506 +10068 vw253 2024-09-04 I SPAC30C2.03 CDS controlled_curation removed term=conserved in eukaryotes; date=20240506 +10068 vw253 2024-09-04 I SPAC30C2.03 CDS controlled_curation removed term=conserved in fungi; date=20240506 +10068 vw253 2024-09-04 I SPAC30C2.03 CDS product added NTPase related protein +10068 vw253 2024-09-04 I SPAC30C2.03 CDS product removed RNAse P component +10068 vw253 2024-09-04 III SPCC4G3.16 rib2 CDS product added tandem fusion lysine methyltransferase/ citidine deaminase involved in riboflavin biosynthesis +10068 vw253 2024-09-04 III SPCC4G3.16 rib2 CDS product removed tandem fusion elongation factor lysine methyltransferase/ citidine deaminase involved in riboflavin biosynthesis +10067 vw253 2024-09-04 I SPAP27G11.04c tad3 CDS product added tRNA specific adenosine-34 deaminase subunit Tad3 +10067 vw253 2024-09-04 I SPAP27G11.04c tad3 CDS product removed tRNA specific adenosine deaminase subunit Tad3 +10066 vw253 2024-09-04 I SPAC922.04 CDS controlled_curation added term=species distribution, conserved in eukaryotes; db_xref=PMID:37156916; date=20140820 +10066 vw253 2024-09-04 I SPAC922.04 CDS controlled_curation added term=species distribution, conserved in fungi; db_xref=PMID:37156916; date=20140820 +10066 vw253 2024-09-04 I SPAC922.04 CDS controlled_curation removed term=species distribution, conserved in eukaryotes; db_xref=PMID:37156916 date=20140820 +10066 vw253 2024-09-04 I SPAC922.04 CDS controlled_curation removed term=species distribution, conserved in fungi; db_xref=PMID:37156916 date=20140820 10056 vw253 2024-09-03 I SPAC7D4.07c trx1 CDS controlled_curation added term=species distribution, conserved in metazoa; date=20240903 10056 vw253 2024-09-03 I SPAC7D4.07c trx1 CDS controlled_curation added term=species distribution, conserved in vertebrates; date=20240903 10056 vw253 2024-09-03 I SPAC8F11.06 brr6 CDS controlled_curation added term=species distribution, conserved in metazoa; date=20240903