I ran the getting started nature code and got an error about waterbody.so library not loaded libc++ Crashed: 09/19 12:07AM outputs/hello_world/0/logs/coarse.err reason='OSError: dlopen(/Users/andrewtriboletti/infinigen/infinigen/terrain/lib/cpu/elements/waterbody.so, 0x0006): Library not loaded: @rpath/libc++.1.dylib' node=None fatal=True

[andytriboletti]

Describe the bug

A clear and concise description of what the bug is.
I ran the example code and got an error

Steps to Reproduce

What version of the code were you using?

Tell us the commit & commit hash from git log

What command did you run?

(base) andrewtriboletti@Andrews-MacBook-Pro infinigen % python -m infinigen.datagen.manage_jobs --output_folder outputs/hello_world --num_scenes 1 --specific_seed 0
--configs desert.gin simple.gin --pipeline_configs local_16GB.gin monocular.gin blender_gt.gin --pipeline_overrides LocalScheduleHandler.use_gpu=False

What are your FULL output logs?

Provide the FULL output logs from your command as a txt file.

Crashed: 09/19 12:07AM outputs/hello_world/0/logs/coarse.err reason='OSError: dlopen(/Users/andrewtriboletti/infinigen/infinigen/terrain/lib/cpu/elements/waterbody.so, 0x0006): Library not loaded: @rpath/libc++.1.dylib' node=None fatal=True

If this is your first time running Infinigen, what are the full install logs?**

Run pip install -v -e . > logs.txt 2>&1 and send logs.txt as an attachment.

Platform

• OS & OS Version:
• GPU (?) :
• GPU Driver Version (?) :
• RAM (GB):

Additional context

Add any other context about the problem here.

[araistrick]

Could you provide your full install logs? pip install -v -e . > logs.txt 2>&1

Alternatively, just run bash scripts/install/compile_terrain.sh | tee logs.txt and provide the logs.txt

[andytriboletti]

I ran:
bash scripts/install/compile_terrain.sh | tee logs.txt

output:
(base) andrewtriboletti@Andrews-MacBook-Pro infinigen % bash scripts/install/compile_terrain.sh | tee logs.txt
skipping cuda
source/cpu/utils/FastNoiseLite.cpp:8:17: warning: using directive refers to implicitly-defined namespace 'std'
8 | using namespace std;
| ^
1 warning generated.
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/utils/FastNoiseLite.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/elements/voronoi_rocks.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/elements/upsidedown_mountains.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/elements/ground.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/elements/warped_rocks.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/elements/mountains.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/elements/landtiles.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/elements/atmosphere.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/elements/waterbody.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/chunkyrock.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/cobble_stone.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/cracked_ground.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/dirt.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/ice.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/mountain.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/mud.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/sand.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/sandstone.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/snow.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/soil.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/surfaces/stone.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/meshing/cube_spherical_mesher.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/meshing/frontview_spherical_mesher.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/meshing/uniform_mesher.so
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
compiled lib/cpu/meshing/utils.so
In file included from source/cpu/soil_machine/SoilMachine.cpp:18:
source/cpu/soil_machine/layermap.h:112:19: warning: unqualified call to 'std::forward' [-Wunqualified-std-cast-call]
112 | try{ new (E)sec(forward(args)...); }
| ^
| std::
source/cpu/soil_machine/layermap.h:211:29: note: in instantiation of function template specialization 'secpool::get<double &, unsigned long &>' requested here
211 | add(ivec2(i, j), pool.get(h, layers[l].type));
| ^
source/cpu/soil_machine/layermap.h:112:19: warning: unqualified call to 'std::forward' [-Wunqualified-std-cast-call]
112 | try{ new (E)sec(forward(args)...); }
| ^
| std::
source/cpu/soil_machine/layermap.h:112:19: warning: unqualified call to 'std::forward' [-Wunqualified-std-cast-call]
112 | try{ new (E)sec(forward(args)...); }
| ^
| std::
source/cpu/soil_machine/particle/particle.h:101:32: note: in instantiation of function template specialization 'secpool::get<float &, unsigned long &>' requested here
101 | sec addition = map.pool.get(transfer, param.cascades);
| ^
In file included from source/cpu/soil_machine/SoilMachine.cpp:18:
source/cpu/soil_machine/layermap.h:112:19: warning: unqualified call to 'std::forward' [-Wunqualified-std-cast-call]
112 | try{ new (E)sec(forward(args)...); }
| ^
| std::
source/cpu/soil_machine/layermap.h:112:19: warning: unqualified call to 'std::forward' [-Wunqualified-std-cast-call]
112 | try{ new (E)sec(forward(args)...); }
| ^
| std::
source/cpu/soil_machine/particle/water.h:148:32: note: in instantiation of function template specialization 'secpool::get<double, unsigned long &>' requested here
148 | sec addition = map.pool.get(-soils[contains].equratecdiffvolume, contains);
| ^
In file included from source/cpu/soil_machine/SoilMachine.cpp:18:
source/cpu/soil_machine/layermap.h:112:19: warning: unqualified call to 'std::forward' [-Wunqualified-std-cast-call]
112 | try{ new (E)sec(forward(args)...); }
| ^
| std::
source/cpu/soil_machine/layermap.h:112:19: warning: unqualified call to 'std::forward' [-Wunqualified-std-cast-call]
112 | try{ new (E)sec(forward(args)...); }
| ^
| std::
source/cpu/soil_machine/particle/water.h:179:25: note: in instantiation of function template specialization 'secpool::get<double, int &>' requested here
179 | addition = map.pool.get(volume*volumeFactor, soilmap["Air"]);
| ^
In file included from source/cpu/soil_machine/SoilMachine.cpp:18:
source/cpu/soil_machine/layermap.h:112:19: warning: unqualified call to 'std::forward' [-Wunqualified-std-cast-call]
112 | try{ new (E)sec(forward(args)...); }
| ^
| std::
source/cpu/soil_machine/layermap.h:112:19: warning: unqualified call to 'std::forward' [-Wunqualified-std-cast-call]
112 | try{ new (E)sec(forward(args)...); }
| ^
| std::
source/cpu/soil_machine/particle/water.h:302:32: note: in instantiation of function template specialization 'secpool::get<double &, int &>' requested here
302 | map.add(bpos, map.pool.get(transfer, soilmap["Air"]));
| ^
In file included from source/cpu/soil_machine/SoilMachine.cpp:18:
source/cpu/soil_machine/layermap.h:112:19: warning: unqualified call to 'std::forward' [-Wunqualified-std-cast-call]
112 | try{ new (E)sec(forward(args)...); }
| ^
| std::
10 warnings generated.
compiled lib/cpu/soil_machine/SoilMachine.so
/Users/andrewtriboletti/infinigen
In file included from ocmesher/source/core.cpp:6:
ocmesher/source/core.h:19:9: warning: 'INT_MAX' macro redefined [-Wmacro-redefined]
19 | #define INT_MAX 2147483647
| ^
/usr/local/Cellar/llvm/18.1.8/lib/clang/18/include/limits.h:46:9: note: previous definition is here
46 | #define INT_MAX INT_MAX
| ^
In file included from ocmesher/source/core.cpp:6:
ocmesher/source/core.h:90:37: warning: & has lower precedence than !=; != will be evaluated first [-Wparentheses]
90 | if (v[vid].coords[p]&1 != 0) {
| ^~~~~~~
ocmesher/source/core.h:90:37: note: place parentheses around the '!=' expression to silence this warning
90 | if (v[vid].coords[p]&1 != 0) {
| ^
| ( )
ocmesher/source/core.h:90:37: note: place parentheses around the & expression to evaluate it first
90 | if (v[vid].coords[p]&1 != 0) {
| ^
| ( )
ocmesher/source/core.h:209:27: warning: & has lower precedence than ==; == will be evaluated first [-Wparentheses]
209 | if (coords[i] & ((1<<(L-current.c.L-1))-1) == 0) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ocmesher/source/core.h:209:27: note: place parentheses around the '==' expression to silence this warning
209 | if (coords[i] & ((1<<(L-current.c.L-1))-1) == 0) {
| ^
| ( )
ocmesher/source/core.h:209:27: note: place parentheses around the & expression to evaluate it first
209 | if (coords[i] & ((1<<(L-current.c.L-1))-1) == 0) {
| ^
| ( )
ocmesher/source/core.h:242:23: warning: & has lower precedence than ==; == will be evaluated first [-Wparentheses]
242 | if (coords[i] & ((1<<(L-current.c.L-gl))-1) == 0) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ocmesher/source/core.h:242:23: note: place parentheses around the '==' expression to silence this warning
242 | if (coords[i] & ((1<<(L-current.c.L-gl))-1) == 0) {
| ^
| ( )
ocmesher/source/core.h:242:23: note: place parentheses around the & expression to evaluate it first
242 | if (coords[i] & ((1<<(L-current.c.L-gl))-1) == 0) {
| ^
| ( )
4 warnings generated.
ld: warning: reexported library with install name '/usr/local/opt/llvm/lib/libunwind.1.dylib' found at '/usr/local/Cellar/llvm/18.1.8/lib/libunwind.1.0.dylib' couldn't be matched with any parent library and will be linked directly
/Users/andrewtriboletti/infinigen

the contents of logs.txt:
skipping cuda
compiled lib/cpu/utils/FastNoiseLite.so
compiled lib/cpu/elements/voronoi_rocks.so
compiled lib/cpu/elements/upsidedown_mountains.so
compiled lib/cpu/elements/ground.so
compiled lib/cpu/elements/warped_rocks.so
compiled lib/cpu/elements/mountains.so
compiled lib/cpu/elements/landtiles.so
compiled lib/cpu/elements/atmosphere.so
compiled lib/cpu/elements/waterbody.so
compiled lib/cpu/surfaces/chunkyrock.so
compiled lib/cpu/surfaces/cobble_stone.so
compiled lib/cpu/surfaces/cracked_ground.so
compiled lib/cpu/surfaces/dirt.so
compiled lib/cpu/surfaces/ice.so
compiled lib/cpu/surfaces/mountain.so
compiled lib/cpu/surfaces/mud.so
compiled lib/cpu/surfaces/sand.so
compiled lib/cpu/surfaces/sandstone.so
compiled lib/cpu/surfaces/snow.so
compiled lib/cpu/surfaces/soil.so
compiled lib/cpu/surfaces/stone.so
compiled lib/cpu/meshing/cube_spherical_mesher.so
compiled lib/cpu/meshing/frontview_spherical_mesher.so
compiled lib/cpu/meshing/uniform_mesher.so
compiled lib/cpu/meshing/utils.so
compiled lib/cpu/soil_machine/SoilMachine.so
/Users/andrewtriboletti/infinigen
/Users/andrewtriboletti/infinigen

Thank you!