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GLM-HMM #344

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anuj-sp opened this issue Sep 22, 2023 · 4 comments
Open

GLM-HMM #344

anuj-sp opened this issue Sep 22, 2023 · 4 comments

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@anuj-sp
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anuj-sp commented Sep 22, 2023

Hello,

I have not been able to locate a tutorial/example for a GLM-HMM that has been implemented in the ssm package. Is this functionality already available? If so, is there any documentation to have a look at?

@thejuc
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thejuc commented Sep 25, 2023

I would also like to see this!

@anne-urai
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@slinderman
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Thanks @anne-urai! I think the only difference from the SSM example is that this model has a static transition matrix. If I recall correctly, the SSM example had input-driven dynamics. This logistic regression HMM could be a good enough for many applications though.

@JustFineNeuro
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Building on this, is there a straightforward to (1) use this with hmm.sample. It seems to throw me an error, which I think is related to passing a vector of inputs. And (2), is the capacity for combining this with input-driven transitions baked into DYNAMAX or only sim?

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