-
Notifications
You must be signed in to change notification settings - Fork 31
142 lines (120 loc) · 4.15 KB
/
tests.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
name: Tests
on:
push:
branches:
- '*'
pull_request:
branches:
- '*'
workflow_dispatch:
jobs:
code:
name: code style
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: psf/black@stable
- uses: actions/setup-python@v5
with:
python-version: '3.12'
- uses: isort/isort-action@master
with:
configuration: --profile black --filter-files --force-sort-within-sections --check-only --diff
- name: Install Black with Jupyter extension
run: |
pip install black[jupyter]
- name: Check code style of Jupyter notebooks
run: |
black --diff --line-length 77 doc/tutorials/*.ipynb
tests:
name: ${{ matrix.os }}-py${{ matrix.python-version }}${{ matrix.LABEL }}
runs-on: ${{ matrix.os }}
timeout-minutes: 15
env:
MPLBACKEND: agg
PYTEST_ARGS: --reruns 2 -n 2 --cov=kikuchipy
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, windows-latest, macos-latest]
python-version: ['3.11', '3.12']
include:
- os: ubuntu-latest
python-version: '3.10'
DEPENDENCIES: dask==2021.8.1 diffsims==0.5.2 hyperspy>=2 matplotlib==3.5 numba==0.57 numpy==1.23.0 orix==0.12.1 pooch==1.3.0 pyebsdindex==0.2.0 scikit-image==0.21.0
LABEL: -oldest
- os: ubuntu-latest
python-version: '3.12'
LABEL: -minimum_requirement
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies and package
shell: bash
run: |
pip install wheel
pip install -U -e ".[tests,coverage]"
- name: Install oldest supported version
if: contains(matrix.LABEL, 'oldest')
run: |
pip install ${{ matrix.DEPENDENCIES }}
- name: Install optional dependencies on Linux and Windows
if: ${{ contains(matrix.LABEL, 'minimum_requirement') == false && matrix.os != 'macos-latest' }}
shell: bash
run: |
pip install -e ".[all]"
pip install pyopencl
- name: Install optional dependencies on macOS (without nlopt)
if: ${{ contains(matrix.LABEL, 'minimum_requirement') == false && matrix.os == 'macos-latest' }}
shell: bash
run: |
pip install -e .
pip install "pyebsdindex[gpu]" pyvista
- name: Display Python, pip and package versions
run: |
python -V
pip -V
pip list
- name: Set up headless display necessary for PyVista on Linux
if: ${{ matrix.os == 'ubuntu-latest' }}
run: |
sudo apt-get update
sudo apt-get install xvfb
/sbin/ldconfig -p | grep stdc++ # Temporarily check location
- name: Set up headless display necessary for PyVista on Windows
if: ${{ matrix.os == 'windows-latest' }}
uses: pyvista/setup-headless-display-action@v1
- name: Run docstring tests
if: ${{ matrix.os == 'ubuntu-latest' }}
continue-on-error: true
run: |
xvfb-run pytest src --doctest-modules --doctest-continue-on-failure
- name: Run tests in a virtual X server environment on Ubuntu
if: ${{ matrix.os == 'ubuntu-latest' }}
run: |
sudo apt-get update
sudo apt-get install xvfb
xvfb-run pytest ${{ env.PYTEST_ARGS }}
- name: Run tests on Windows or macOS
if: ${{ matrix.os != 'ubuntu-latest' }}
run: |
pytest ${{ env.PYTEST_ARGS }}
- name: Generate line coverage
run: |
coverage report --show-missing
- name: Upload coverage to Coveralls
if: ${{ matrix.os == 'ubuntu-latest' }}
uses: AndreMiras/coveralls-python-action@develop
with:
parallel: true
coveralls-finish:
needs: tests
runs-on: ubuntu-latest
steps:
- name: Coveralls finished
uses: AndreMiras/coveralls-python-action@develop
with:
parallel-finished: true