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Handle when no assembly for a taxid can be found #12

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lkuchenb opened this issue Dec 24, 2020 · 0 comments
Open

Handle when no assembly for a taxid can be found #12

lkuchenb opened this issue Dec 24, 2020 · 0 comments
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bug Something isn't working enhancement New feature or request
Milestone
1.0.0

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@lkuchenb
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Currently download_proteins_entrez.py silently ignores when no assembly can be found for a taxid.

Add handling and publish ignored taxid with results.
@lkuchenb lkuchenb added the enhancement New feature or request label Dec 24, 2020
@skrakau skrakau added the bug Something isn't working label Dec 24, 2020
@skrakau skrakau added this to the 1.0.0 milestone Jan 5, 2021
AntoniaSchuster added a commit to AntoniaSchuster/metapep that referenced this issue Mar 22, 2022
@AntoniaSchuster @d4straub
Update documentation (qbic-pipelines#12)
72958a2 
* update docs

* build schema, fix sample_n

* update CHANGELOG.md, lint output.md

* Update docs/output.md

Co-authored-by: Daniel Straub <[email protected]>

* Update docs/output.md

Co-authored-by: Daniel Straub <[email protected]>

* Update docs/output.md

Co-authored-by: Daniel Straub <[email protected]>

* Update output.md

Co-authored-by: Daniel Straub <[email protected]>
@tillenglert tillenglert mentioned this issue Mar 8, 2024
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@skrakau @lkuchenb