steps

conda create --name qtp-mass-spec
source activate qtp-mass-spec
pip install https://github.com/qiita-spots/qiita_client/archive/master.zip
pip install . 
cd scripts
python ./configure_qtp_mass_spec --env-script "source activate qtp-mass-spec" --server-cert "/home/qiita/qiita/qiita/qiita_core/support_files/server.crt"
export QIITA_SERVER_CERT="/home/qiita/qiita/qiita/qiita_core/support_files/server.crt"


#Starting qiita
source activate qiita
redis-server
sudo service postgresql start
qiita pet webserver start

Metabolomic - data type for artifact type in database - not necessary to think about for qtp, but will for qp (https://github.com/qiita-spots/qp-deblur/blob/master/qp_deblur/tests/test_deblur.py#L89-L111)


#if we have a problem with commands not being availabe (e.g. Generate HTML Summary)
qiita-env clean_test
qiita plugins update
qiita pet webserver start

#Caveats
For Summary, we must give it artifact id as input_data, for Validate, we can give it file path tuples like I tried before