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version.xml
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version.xml
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<package name='starbeast3' version='1.1.9'>
<depends on='BEAST.base' atleast='2.7.3'/>
<depends on='BEAST.app' atleast='2.7.3'/>
<depends on='BEASTLabs' atleast='2.0.0'/>
<depends on='ORC' atleast='1.2.0'/>
<depends on="SA" atleast="2.1.0"/>
<service type="beastfx.app.inputeditor.InputEditor">
<provider classname="starbeast3.app.beauti.StarBeast3ClockInputEditor"/>
<provider classname="starbeast3.app.beauti.StarBeastTipDatesInputEditor"/>
<provider classname="starbeast3.app.beauti.MRCAPriorInputEditorSB3"/>
</service>
<service type="beastfx.app.beauti.PriorProvider">
<provider classname="starbeast3.app.beauti.MRCAPriorProviderSB3"/>
</service>
<service type="beast.base.core.BEASTInterface">
<provider classname="starbeast3.app.beauti.StarBeastAlignmentProvider3"/>
<provider classname="starbeast3.simulation.DirectSimulator"/>
<provider classname="starbeast3.core.MCMCsb3"/>
<provider classname="starbeast3.core.OperatorScheduleRecalculator"/>
<provider classname="starbeast3.core.ParallelMCMC"/>
<provider classname="starbeast3.simulation.SampleGeneTreeTopologyCount"/>
<provider classname="starbeast3.core.SampleTimeLog"/>
<provider classname="starbeast3.evolution.branchratemodel.RandomLocalClockModelSB3"/>
<provider classname="starbeast3.evolution.branchratemodel.SharedSpeciesClockModel"/>
<provider classname="starbeast3.evolution.branchratemodel.StrictClockModelSB3"/>
<provider classname="starbeast3.evolution.branchratemodel.UCRelaxedClockModelSB3"/>
<provider classname="starbeast3.evolution.speciation.ConstantPopulations"/>
<provider classname="starbeast3.evolution.speciation.BirthProcess"/>
<provider classname="starbeast3.tree.BranchLengthLogger"/>
<provider classname="starbeast3.tree.StarBeast3TaxonSet"/>
<provider classname="starbeast3.genekernel.GeneTreeKernel"/>
<provider classname="starbeast3.genekernel.GTKGeneTree"/>
<provider classname="starbeast3.genekernel.GTKPointerTree"/>
<provider classname="starbeast3.genekernel.GTKPrior"/>
<provider classname="starbeast3.evolution.speciation.GeneTreeForSpeciesTreeDistribution"/>
<provider classname="starbeast3.inference.ShortChainsMCMC"/>
<provider classname="starbeast3.inference.ShortMCMC"/>
<provider classname="starbeast3.inference.ShortMCMCLogger"/>
<provider classname="starbeast3.math.distributions.InverseGamma"/>
<provider classname="starbeast3.math.distributions.MRCAPriorSB3"/>
<provider classname="starbeast3.operators.AVMNCubeOperator"/>
<provider classname="starbeast3.operators.BactrianSubtreeSlide"/>
<provider classname="starbeast3.operators.BactrianTreeScaleOperator"/>
<provider classname="starbeast3.operators.BactrianUpDownOperator"/>
<provider classname="starbeast3.operators.ConstantDistanceOperatorSpeciesTree"/>
<provider classname="starbeast3.operators.CoordinatedExchangeRates"/>
<provider classname="starbeast3.operators.CoordinatedExponential"/>
<provider classname="starbeast3.operators.CoordinatedUniform"/>
<provider classname="starbeast3.operators.DiscreteRateCycle"/>
<provider classname="starbeast3.operators.DiscreteRateUniform"/>
<provider classname="starbeast3.operators.SampledNodeDateRandomWalkerSB3"/>
<provider classname="starbeast3.operators.EpochOperator"/>
<provider classname="starbeast3.operators.FixedHeightSubtreePruneRegraftOperator"/>
<provider classname="starbeast3.operators.GTKExpander"/>
<provider classname="starbeast3.operators.MultiStepOperatorSchedule"/>
<provider classname="starbeast3.operators.NEROperator_dAE_dBE_dCE"/>
<provider classname="starbeast3.operators.NodeReheight2"/>
<provider classname="starbeast3.operators.ParallelDistSet"/>
<provider classname="starbeast3.operators.ParallelMCMCRealParameterOperator"/>
<provider classname="starbeast3.operators.ParallelMCMCTreeOperator"/>
<provider classname="starbeast3.operators.ParallelMCMCTreeOperatorTreeDistribution"/>
<provider classname="starbeast3.operators.PopSizeGibbsSampler"/>
<provider classname="starbeast3.operators.RealCycle"/>
<provider classname="starbeast3.tree.SpeciesTree"/>
<provider classname="starbeast3.core.SpeciesTreeLogger"/>
<provider classname="starbeast3.evolution.speciation.SpeciesTreePrior"/>
<provider classname="starbeast3.evolution.branchratemodel.StarBeast3Clock"/>
<provider classname="starbeast3.core.StarBeastStartState"/>
<provider classname="starbeast3.tree.BinaryNode"/>
<provider classname="starbeast3.tree.BinaryTree"/>
</service>
</package>