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RDKit From Molecule node can't render molecule with wedged bond #134

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iwatobipen opened this issue Sep 24, 2023 · 1 comment
Open

RDKit From Molecule node can't render molecule with wedged bond #134

iwatobipen opened this issue Sep 24, 2023 · 1 comment

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@iwatobipen
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Dear developper,
Thanks for developping really useful node for drug discovery,
I found that RDKit From Molecule node can't render chiral modelcule with wedged bond.
I think it's better to render molecule with wedge bond.

Screenshot from 2023-09-24 22-21-08
Screenshot from 2023-09-24 22-20-56

Thanks,
Taka

@greglandrum
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@manuelschwarze : @iwatobipen and I were looking at this together at the UGM. I find the behavior quite strange: the SMILES renderer does show a wedged bond, but the renderer from an RDKit molecule does not.
This makes me think that the problem is in the Java code which calls the C++ molecule drawing code, not the C++ code itself, but maybe you have other thoughts?

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